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ALM08753.1 ALM08753.1 ALM08850.1 ALM08850.1 ALM08104.1 ALM08104.1 ALM06392.1 ALM06392.1 ALM06400.1 ALM06400.1 ALM06411.1 ALM06411.1 ALM06442.1 ALM06442.1 gpmI gpmI kynU kynU kmo kmo ALM06578.1 ALM06578.1 ALM06648.1 ALM06648.1 ALM06653.1 ALM06653.1 gcvT gcvT ALM06741.1 ALM06741.1 ALM06800.1 ALM06800.1 ALM06852.1 ALM06852.1 ALM06868.1 ALM06868.1 ALM06882.1 ALM06882.1 ALM06959.1 ALM06959.1 ALM06965.1 ALM06965.1 ALM07043.1 ALM07043.1 ALM07151.1 ALM07151.1 ALM07153.1 ALM07153.1 glpK glpK ALM07221.1 ALM07221.1 ALM07231.1 ALM07231.1 ALM07268.1 ALM07268.1 ALM07293.1 ALM07293.1 ALM07369.1 ALM07369.1 ALM07396.1 ALM07396.1 ALM07414.1 ALM07414.1 ALM09190.1 ALM09190.1 murQ murQ ALM07490.1 ALM07490.1 ALM07520.1 ALM07520.1 ALM07521.1 ALM07521.1 ALM09207.1 ALM09207.1 ALM07579.1 ALM07579.1 ALM07727.1 ALM07727.1 ALM07740.1 ALM07740.1 ALM09242.1 ALM09242.1 ALM07930.1 ALM07930.1 ALM07935.1 ALM07935.1 ALM08100.1 ALM08100.1 ALM09254.1 ALM09254.1 hutU hutU ALM08148.1 ALM08148.1 ALM08208.1 ALM08208.1 ALM08230.1 ALM08230.1 ALM08339.1 ALM08339.1 ALM08505.1 ALM08505.1 ALM08508.1 ALM08508.1 ALM09299.1 ALM09299.1 ALM08622.1 ALM08622.1 ALM08653.1 ALM08653.1 ALM09073.1 ALM09073.1 ALM09072.1 ALM09072.1 ALM09038.1 ALM09038.1 dtd dtd ALM09335.1 ALM09335.1 gcvH gcvH ALM08863.1 ALM08863.1 ALM08859.1 ALM08859.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALM08753.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family. (366 aa)
ALM08850.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
ALM08104.1Homogentisate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
ALM06392.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
ALM06400.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
ALM06411.1phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
ALM06442.11-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
gpmIPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (505 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (422 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. (446 aa)
ALM06578.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
ALM06648.1Xaa-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
ALM06653.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (361 aa)
ALM06741.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
ALM06800.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
ALM06852.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
ALM06868.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
ALM06882.1Purine nucleoside phosphorylase DeoD-type; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
ALM06959.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (459 aa)
ALM06965.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
ALM07043.1Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
ALM07151.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ALM07153.1Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (496 aa)
ALM07221.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
ALM07231.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0173 family. (226 aa)
ALM07268.1Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ALM07293.1Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (401 aa)
ALM07369.16-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (470 aa)
ALM07396.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
ALM07414.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
ALM09190.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
murQN-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (271 aa)
ALM07490.1anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (358 aa)
ALM07520.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (983 aa)
ALM07521.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
ALM09207.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
ALM07579.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1137 aa)
ALM07727.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
ALM07740.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
ALM09242.1Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvP family. (949 aa)
ALM07930.1Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (161 aa)
ALM07935.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
ALM08100.1Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
ALM09254.1Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (669 aa)
ALM08148.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
ALM08208.1Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
ALM08230.1Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
ALM08339.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
ALM08505.1Aspartoacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
ALM08508.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
ALM09299.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
ALM08622.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (517 aa)
ALM08653.1Tryptophan 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
ALM09073.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
ALM09072.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)
ALM09038.1Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family. (219 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (150 aa)
ALM09335.1Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (126 aa)
ALM08863.12-oxoglutarate dehydrogenase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (409 aa)
ALM08859.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
Your Current Organism:
Sediminicola sp. YIK13
NCBI taxonomy Id: 1453352
Other names: S. sp. YIK13
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