(45 nodes) DNA packaging complex network (Monoraphidium neglectum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MNEG_7286	Uncharacterized protein. (689 aa)
	MNEG_2383	CNDH2_N domain-containing protein. (75 aa)
	MNEG_7225	Histone H2A; Belongs to the histone H2A family. (130 aa)
	MNEG_7715	Cnd3 domain-containing protein. (738 aa)
	MNEG_2032	Uncharacterized protein. (446 aa)
	MNEG_8323	Uncharacterized protein. (217 aa)
	MNEG_2384	Uncharacterized protein. (688 aa)
	MNEG_8952	Histone H3. (143 aa)
	MNEG_3965	Uncharacterized protein. (1103 aa)
	MNEG_5343	Histone H2A; Belongs to the histone H2A family. (122 aa)
	MNEG_5368	Structural maintenance of chromosomes protein 2-1. (347 aa)
	MNEG_12546	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	MNEG_4391	Histone H2A; Belongs to the histone H2A family. (130 aa)
	MNEG_12446	Double-strand-break repair-like protein rad21. (343 aa)
	MNEG_3378	H15 domain-containing protein. (225 aa)
	MNEG_13681	Uncharacterized protein. (196 aa)
	MNEG_11378	Histone H2A; Belongs to the histone H2A family. (128 aa)
	MNEG_12793	Helicase, lymphoid-specific. (542 aa)
	MNEG_13637	Chromosome condensation complex condensin, subunit H. (597 aa)
	MNEG_6000	Structural maintenance of chromosomes protein 3. (995 aa)
	MNEG_10907	Uncharacterized protein. (639 aa)
	MNEG_9390	Histone H2A; Belongs to the histone H2A family. (88 aa)
	MNEG_12545	Uncharacterized protein. (662 aa)
	MNEG_12686	Structural maintenance of chromosomes protein 2-2. (588 aa)
	MNEG_13277	Uncharacterized protein. (144 aa)
	MNEG_1947	Uncharacterized protein. (203 aa)
	MNEG_5990	Putative SWI/SNF complex component SNF12 like protein. (556 aa)
	MNEG_5705	Condensin-2 complex subunit G2. (377 aa)
	MNEG_4835	Putative Kinetochore protein NDC80. (515 aa)
	MNEG_16474	Histone H2A; Belongs to the histone H2A family. (128 aa)
	MNEG_4317	Histone H2A; Belongs to the histone H2A family. (128 aa)
	MNEG_6551	Putative Cohesin subunit SA-1. (736 aa)
	MNEG_6677	C3H1-type domain-containing protein. (433 aa)
	MNEG_6878	Histone H3; Belongs to the histone H3 family. (136 aa)
	MNEG_7518	CCHC-type domain-containing protein. (1241 aa)
	MNEG_7718	Rad21_Rec8 domain-containing protein. (726 aa)
	MNEG_12012	Uncharacterized protein. (795 aa)
	MNEG_0048	H15 domain-containing protein. (225 aa)
	MNEG_15265	Structural maintenance of chromosomes protein 1. (249 aa)
	MNEG_2118	Histone H3.3a. (169 aa)
	MNEG_15837	Helicase C-terminal domain-containing protein. (321 aa)
	MNEG_14899	Snf2-related CREBBP activator protein. (594 aa)
	MNEG_16109	Condensin-2 complex subunit D3. (225 aa)
	MNEG_10538	Kinetochore protein nuf2. (360 aa)
	MNEG_6562	Condensin-2 complex subunit D3. (1000 aa)

Your Current Organism:

Monoraphidium neglectum

NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MNEG_0048	MNEG_11378	A0A0D2KCT2	A0A0D2LYX0	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_0048	MNEG_12545	A0A0D2KCT2	A0A0D2M1T8	H15 domain-containing protein.	Uncharacterized protein.	0.618
MNEG_0048	MNEG_12546	A0A0D2KCT2	A0A0D2MLB1	H15 domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.913
MNEG_0048	MNEG_16474	A0A0D2KCT2	A0A0D2LHI1	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_0048	MNEG_2118	A0A0D2KCT2	A0A0D2NMJ1	H15 domain-containing protein.	Histone H3.3a.	0.618
MNEG_0048	MNEG_4317	A0A0D2KCT2	A0A0D2LA54	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_0048	MNEG_4391	A0A0D2KCT2	A0A0D2MKX7	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_0048	MNEG_5343	A0A0D2KCT2	A0A0D2MQB0	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_0048	MNEG_6878	A0A0D2KCT2	A0A0D2L147	H15 domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.618
MNEG_0048	MNEG_7225	A0A0D2KCT2	A0A0D2N3U5	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.729
MNEG_0048	MNEG_7518	A0A0D2KCT2	A0A0D2KZ06	H15 domain-containing protein.	CCHC-type domain-containing protein.	0.508
MNEG_0048	MNEG_8952	A0A0D2KCT2	A0A0D2MXV6	H15 domain-containing protein.	Histone H3.	0.618
MNEG_0048	MNEG_9390	A0A0D2KCT2	A0A0D2M4Y9	H15 domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.508
MNEG_10538	MNEG_12545	A0A0D2JCL9	A0A0D2M1T8	Kinetochore protein nuf2.	Uncharacterized protein.	0.453
MNEG_10538	MNEG_12686	A0A0D2JCL9	A0A0D2M1E0	Kinetochore protein nuf2.	Structural maintenance of chromosomes protein 2-2.	0.578
MNEG_10538	MNEG_13637	A0A0D2JCL9	A0A0D2LRM3	Kinetochore protein nuf2.	Chromosome condensation complex condensin, subunit H.	0.679
MNEG_10538	MNEG_16109	A0A0D2JCL9	A0A0D2LIL1	Kinetochore protein nuf2.	Condensin-2 complex subunit D3.	0.420
MNEG_10538	MNEG_1947	A0A0D2JCL9	A0A0D2NN97	Kinetochore protein nuf2.	Uncharacterized protein.	0.998
MNEG_10538	MNEG_2118	A0A0D2JCL9	A0A0D2NMJ1	Kinetochore protein nuf2.	Histone H3.3a.	0.453
MNEG_10538	MNEG_4835	A0A0D2JCL9	A0A0D2JWS7	Kinetochore protein nuf2.	Putative Kinetochore protein NDC80.	0.999