(6 nodes) Mixed, incl. Nitrite/Sulfite reductase ferredoxin-like half domain, and PAS-associated, C-terminal network (Siansivirga zeaxanthinifaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR04074.1	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (836 aa)
	AJR04075.1	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
	AJR04076.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
	AJR04077.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
	AJR04078.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
	AJR04079.1	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR04074.1	AJR04075.1	AW14_10930	AW14_10935	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR04074.1	AJR04076.1	AW14_10930	AW14_10940	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AJR04074.1	AJR04077.1	AW14_10930	AW14_10945	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
AJR04074.1	AJR04079.1	AW14_10930	AW14_10965	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AJR04075.1	AJR04074.1	AW14_10935	AW14_10930	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.999
AJR04075.1	AJR04076.1	AW14_10935	AW14_10940	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AJR04075.1	AJR04077.1	AW14_10935	AW14_10945	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
AJR04075.1	AJR04078.1	AW14_10935	AW14_10950	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
AJR04075.1	AJR04079.1	AW14_10935	AW14_10965	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
AJR04076.1	AJR04074.1	AW14_10940	AW14_10930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.561
AJR04076.1	AJR04075.1	AW14_10940	AW14_10935	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AJR04076.1	AJR04077.1	AW14_10940	AW14_10945	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJR04076.1	AJR04078.1	AW14_10940	AW14_10950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
AJR04076.1	AJR04079.1	AW14_10940	AW14_10965	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AJR04077.1	AJR04074.1	AW14_10945	AW14_10930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.	0.532
AJR04077.1	AJR04075.1	AW14_10945	AW14_10935	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
AJR04077.1	AJR04076.1	AW14_10945	AW14_10940	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJR04077.1	AJR04078.1	AW14_10945	AW14_10950	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AJR04077.1	AJR04079.1	AW14_10945	AW14_10965	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
AJR04078.1	AJR04075.1	AW14_10950	AW14_10935	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605