(8 nodes) Proton channel activity network (Siansivirga zeaxanthinifaciens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	atpD	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (502 aa)
	AJR02740.1	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
	atpG	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (286 aa)
	atpA	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (526 aa)
	atpH	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (178 aa)
	atpF	ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (166 aa)
	AJR02847.1	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (62 aa)
	atpB	ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (373 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR02740.1	AJR02847.1	AW14_02810	AW14_03525	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR02740.1	atpA	AW14_02810	AW14_03510	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.999
AJR02740.1	atpB	AW14_02810	AW14_03530	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.	0.999
AJR02740.1	atpD	AW14_02810	AW14_02805	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.	0.999
AJR02740.1	atpF	AW14_02810	AW14_03520	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.999
AJR02740.1	atpG	AW14_02810	AW14_03505	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	0.999
AJR02740.1	atpH	AW14_02810	AW14_03515	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.999
AJR02847.1	AJR02740.1	AW14_03525	AW14_02810	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR02847.1	atpA	AW14_03525	AW14_03510	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.999
AJR02847.1	atpB	AW14_03525	AW14_03530	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.	0.999
AJR02847.1	atpD	AW14_03525	AW14_02805	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.	0.999
AJR02847.1	atpF	AW14_03525	AW14_03520	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.999
AJR02847.1	atpG	AW14_03525	AW14_03505	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	0.999
AJR02847.1	atpH	AW14_03525	AW14_03515	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.999
atpA	AJR02740.1	AW14_03510	AW14_02810	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
atpA	AJR02847.1	AW14_03510	AW14_03525	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
atpA	atpB	AW14_03510	AW14_03530	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.	0.999
atpA	atpD	AW14_03510	AW14_02805	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.	0.999
atpA	atpF	AW14_03510	AW14_03520	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.999
atpA	atpG	AW14_03510	AW14_03505	ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	0.999