(8 nodes) Mixed, incl. Heavy-metal-associated domain, and Heavy metal binding domain network (Siansivirga zeaxanthinifaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR02312.1	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
	AJR02313.1	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (584 aa)
	AJR02314.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (833 aa)
	AJR02315.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AJR02316.1	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1246 aa)
	AJR02317.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
	AJR02675.1	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
	AJR03438.1	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (189 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR02312.1	AJR02313.1	AW14_00275	AW14_00280	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.739
AJR02312.1	AJR02314.1	AW14_00275	AW14_00285	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
AJR02312.1	AJR02315.1	AW14_00275	AW14_00290	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AJR02312.1	AJR02316.1	AW14_00275	AW14_00295	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.921
AJR02312.1	AJR02317.1	AW14_00275	AW14_00300	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.493
AJR02312.1	AJR03438.1	AW14_00275	AW14_07165	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.766
AJR02313.1	AJR02312.1	AW14_00280	AW14_00275	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
AJR02313.1	AJR02314.1	AW14_00280	AW14_00285	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
AJR02313.1	AJR02315.1	AW14_00280	AW14_00290	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
AJR02313.1	AJR02316.1	AW14_00280	AW14_00295	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.975
AJR02313.1	AJR02317.1	AW14_00280	AW14_00300	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
AJR02314.1	AJR02312.1	AW14_00285	AW14_00275	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
AJR02314.1	AJR02313.1	AW14_00285	AW14_00280	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.853
AJR02314.1	AJR02315.1	AW14_00285	AW14_00290	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AJR02314.1	AJR02316.1	AW14_00285	AW14_00295	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.928
AJR02314.1	AJR02317.1	AW14_00285	AW14_00300	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
AJR02314.1	AJR02675.1	AW14_00285	AW14_02450	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
AJR02314.1	AJR03438.1	AW14_00285	AW14_07165	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.933
AJR02315.1	AJR02312.1	AW14_00290	AW14_00275	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AJR02315.1	AJR02313.1	AW14_00290	AW14_00280	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.966