STRINGSTRING
AJR03219.1 AJR03219.1 AJR03220.1 AJR03220.1 AJR03221.1 AJR03221.1 AJR03222.1 AJR03222.1 AJR04801.1 AJR04801.1 AJR03223.1 AJR03223.1 AJR03224.1 AJR03224.1 AJR03225.1 AJR03225.1 AJR03226.1 AJR03226.1 AJR03227.1 AJR03227.1 AJR03228.1 AJR03228.1 AJR03230.1 AJR03230.1 AJR03727.1 AJR03727.1 AJR04904.1 AJR04904.1 AJR04485.1 AJR04485.1 AJR04492.1 AJR04492.1 AJR04532.1 AJR04532.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR03219.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AJR03220.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
AJR03221.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AJR03222.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (961 aa)
AJR04801.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (499 aa)
AJR03223.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1028 aa)
AJR03224.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)
AJR03225.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
AJR03226.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1094 aa)
AJR03227.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AJR03228.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (759 aa)
AJR03230.1Sodium/glucose cotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (550 aa)
AJR03727.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (792 aa)
AJR04904.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (618 aa)
AJR04485.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
AJR04492.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa)
AJR04532.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (753 aa)
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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