STRINGSTRING
AJR02562.1 AJR02562.1 AJR02563.1 AJR02563.1 AJR02565.1 AJR02565.1 AJR02566.1 AJR02566.1 AJR04717.1 AJR04717.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR02562.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
AJR02563.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AJR02565.1Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (311 aa)
AJR02566.1Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
AJR04717.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (59 aa)
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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