5 items (Siansivirga zeaxanthinifaciens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR03031.1	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)
	AJR04304.1	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	AJR04308.1	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	kbl	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (395 aa)
	AJR04433.1	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR03031.1	AJR04304.1	AW14_04685	AW14_12235	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AJR03031.1	AJR04308.1	AW14_04685	AW14_12255	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AJR03031.1	AJR04433.1	AW14_04685	AW14_12990	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
AJR03031.1	kbl	AW14_04685	AW14_12985	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	0.900
AJR04304.1	AJR03031.1	AW14_12235	AW14_04685	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.912
AJR04304.1	AJR04308.1	AW14_12235	AW14_12255	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR04304.1	AJR04433.1	AW14_12235	AW14_12990	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AJR04304.1	kbl	AW14_12235	AW14_12985	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	0.921
AJR04308.1	AJR03031.1	AW14_12255	AW14_04685	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.904
AJR04308.1	AJR04304.1	AW14_12255	AW14_12235	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR04308.1	AJR04433.1	AW14_12255	AW14_12990	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AJR04308.1	kbl	AW14_12255	AW14_12985	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	0.911
AJR04433.1	AJR03031.1	AW14_12990	AW14_04685	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.901
AJR04433.1	AJR04304.1	AW14_12990	AW14_12235	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AJR04433.1	AJR04308.1	AW14_12990	AW14_12255	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AJR04433.1	kbl	AW14_12990	AW14_12985	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	0.991
kbl	AJR03031.1	AW14_12985	AW14_04685	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	Malonic semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.900
kbl	AJR04304.1	AW14_12985	AW14_12235	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
kbl	AJR04308.1	AW14_12985	AW14_12255	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
kbl	AJR04433.1	AW14_12985	AW14_12990	2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.	NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991