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| | AJR02298.1 | Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa) |
| | AJR02338.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa) |
| | AJR02354.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa) |
| | AJR02368.1 | Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa) |
| | AJR02374.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa) |
| | AJR02399.1 | Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa) |
| | AJR02408.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | AJR04709.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (209 aa) |
| | AJR02435.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa) |
| | AJR02477.1 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa) |
| | AJR02509.1 | Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa) |
| | AJR02527.1 | 4-carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (111 aa) |
| | AJR04719.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa) |
| | AJR04720.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (184 aa) |
| | AJR02603.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (676 aa) |
| | AJR02620.1 | Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa) |
| | AJR02624.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa) |
| | AJR02625.1 | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | AJR02643.1 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa) |
| | AJR02654.1 | DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa) |
| | AJR02660.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa) |
| | AJR02679.1 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. (346 aa) |
| | AJR02685.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa) |
| | uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (597 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (452 aa) |
| | AJR02741.1 | Peptidase S24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family. (146 aa) |
| | AJR02742.1 | SOS mutagenesis and repair protein UmuC; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa) |
| | recO | DNA recombination protein RecO; Involved in DNA repair and RecF pathway recombination. (239 aa) |
| | AJR02769.1 | Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1115 aa) |
| | AJR02774.1 | Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (182 aa) |
| | AJR02778.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa) |
| | AJR02779.1 | LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa) |
| | AJR02796.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa) |
| | recA | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (337 aa) |
| | AJR02833.1 | Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa) |
| | AJR04769.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (552 aa) |
| | AJR02950.1 | Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa) |
| | AJR04791.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (203 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (365 aa) |
| | AJR03046.1 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (202 aa) |
| | AJR03055.1 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | AJR03059.1 | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa) |
| | AJR03060.1 | Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa) |
| | AJR03063.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (944 aa) |
| | AJR03152.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa) |
| | ruvB | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (340 aa) |
| | ruvA | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (193 aa) |
| | AJR03171.1 | SprA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2435 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (870 aa) |
| | AJR03291.1 | ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa) |
| | AJR03336.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa) |
| | AJR03337.1 | LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa) |
| | AJR04817.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (626 aa) |
| | AJR03386.1 | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa) |
| | AJR03403.1 | 2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa) |
| | recR | Recombinase RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (205 aa) |
| | AJR03424.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | AJR03438.1 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (189 aa) |
| | AJR03453.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa) |
| | AJR03454.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa) |
| | dacA | Membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (261 aa) |
| | AJR03558.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa) |
| | AJR03608.1 | Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa) |
| | recF | DNA recombination protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (359 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (620 aa) |
| | AJR03719.1 | Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa) |
| | AJR04893.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1300 aa) |
| | AJR03757.1 | ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. (714 aa) |
| | AJR03770.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa) |
| | AJR03771.1 | LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa) |
| | AJR03803.1 | Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (115 aa) |
| | AJR03806.1 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (734 aa) |
| | AJR03812.1 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa) |
| | AJR03826.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa) |
| | AJR03863.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa) |
| | AJR03880.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa) |
| | AJR03884.1 | Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (434 aa) |
| | AJR03887.1 | Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family. (172 aa) |
| | AJR03893.1 | FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (494 aa) |
| | AJR03894.1 | Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa) |
| | AJR03895.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (437 aa) |
| | AJR03973.1 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa) |
| | AJR04006.1 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa) |
| | AJR04008.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa) |
| | AJR04027.1 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa) |
| | AJR04077.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa) |
| | AJR04081.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa) |
| | AJR04083.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa) |
| | AJR04084.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa) |
| | AJR04085.1 | LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa) |
| | ung | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (221 aa) |
| | AJR04932.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (461 aa) |
| | AJR04179.1 | DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (723 aa) |
| | recG | ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (700 aa) |
| | AJR04274.1 | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa) |
| | AJR04293.1 | Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (219 aa) |
| | AJR04296.1 | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (927 aa) |
| | lon | Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (816 aa) |
| | AJR04324.1 | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (943 aa) |
| | AJR04333.1 | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa) |
| | AJR04342.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa) |
| | AJR04343.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa) |
| | AJR04383.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa) |
| | AJR04389.1 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | AJR04397.1 | Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | katG | Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (744 aa) |
| | tpx | Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (165 aa) |
| | AJR04467.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1360 aa) |
| | AJR04530.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1348 aa) |
| | AJR04545.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1347 aa) |
| | AJR04547.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa) |
| | AJR04548.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa) |
| | AJR04553.1 | DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA. (550 aa) |
| | ligA | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (664 aa) |
| | AJR04602.1 | RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (667 aa) |
| | AJR04655.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa) |
| | AJR04678.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa) |
