STRINGSTRING
AJR04425.1 AJR04425.1 AJR03448.1 AJR03448.1 AJR03450.1 AJR03450.1 AJR03711.1 AJR03711.1 AJR04028.1 AJR04028.1 AJR03154.1 AJR03154.1 AJR03158.1 AJR03158.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR04425.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
AJR03448.1Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
AJR03450.1Bifunctional cbb3-type cytochrome c oxidase subunit I/II; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (727 aa)
AJR03711.1Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
AJR04028.1Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
AJR03154.1Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
AJR03158.1Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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