(38 nodes) Glycoside hydrolase superfamily network (Siansivirga zeaxanthinifaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR02912.1	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1062 aa)
	glgB	Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (635 aa)
	AJR03087.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family. (798 aa)
	AJR03168.1	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	AJR03226.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1094 aa)
	AJR03228.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (759 aa)
	AJR03229.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family. (491 aa)
	AJR04803.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (628 aa)
	AJR04821.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (437 aa)
	AJR03727.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (792 aa)
	AJR04897.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (603 aa)
	AJR04898.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (135 aa)
	AJR04899.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (213 aa)
	AJR04900.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (581 aa)
	AJR04904.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (618 aa)
	AJR04171.1	beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (968 aa)
	AJR04463.1	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (811 aa)
	AJR04473.1	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (1021 aa)
	AJR04477.1	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (896 aa)
	AJR04539.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family. (492 aa)
	AJR04485.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
	AJR04491.1	Glycoside hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (991 aa)
	AJR04492.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa)
	AJR04493.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (465 aa)
	AJR04496.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)
	AJR04508.1	Beta-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (607 aa)
	AJR04973.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (759 aa)
	AJR04974.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 2 family. (976 aa)
	AJR04975.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1031 aa)
	AJR04978.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (554 aa)
	AJR04993.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (987 aa)
	AJR04538.1	Glucosylceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family. (486 aa)
	AJR04532.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (753 aa)
	AJR02545.1	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AJR04746.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 26 family. (376 aa)
	AJR02904.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	AJR02906.1	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family. (498 aa)
	AJR02907.1	Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR02904.1	AJR02906.1	AW14_03875	AW14_03885	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	0.912
AJR02904.1	AJR02907.1	AW14_03875	AW14_03890	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AJR02904.1	AJR02912.1	AW14_03875	AW14_03915	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AJR02904.1	AJR03087.1	AW14_03875	AW14_04995	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.	0.900
AJR02904.1	AJR03228.1	AW14_03875	AW14_05775	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.900
AJR02904.1	AJR03727.1	AW14_03875	AW14_08910	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR02904.1	AJR04485.1	AW14_03875	AW14_13300	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR02904.1	AJR04492.1	AW14_03875	AW14_13345	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR02904.1	AJR04532.1	AW14_03875	AW14_13705	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR02906.1	AJR02904.1	AW14_03885	AW14_03875	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AJR02906.1	AJR02907.1	AW14_03885	AW14_03890	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
AJR02906.1	AJR02912.1	AW14_03885	AW14_03915	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
AJR02906.1	AJR04463.1	AW14_03885	AW14_13165	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.	0.654
AJR02906.1	AJR04473.1	AW14_03885	AW14_13230	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.	0.654
AJR02906.1	AJR04477.1	AW14_03885	AW14_13250	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.	0.654
AJR02906.1	AJR04491.1	AW14_03885	AW14_13335	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Glycoside hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.	0.654
AJR02906.1	AJR04973.1	AW14_03885	AW14_13450	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.915
AJR02906.1	AJR04975.1	AW14_03885	AW14_13500	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.654
AJR02907.1	AJR02904.1	AW14_03890	AW14_03875	Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AJR02907.1	AJR02906.1	AW14_03890	AW14_03885	Glycosyl hydrolase family 17; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase family 30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family.	0.942