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AJR02604.1 AJR02604.1 AJR03164.1 AJR03164.1 AJR03231.1 AJR03231.1 AJR03716.1 AJR03716.1 AJR04033.1 AJR04033.1 AJR04546.1 AJR04546.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR02604.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
AJR03164.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
AJR03231.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AJR03716.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
AJR04033.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
AJR04546.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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