(6 nodes) Glycosyl hydrolase family 3 N terminal domain network (Siansivirga zeaxanthinifaciens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR04485.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
	AJR04532.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (753 aa)
	AJR04492.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa)
	AJR03228.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (759 aa)
	AJR03727.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (792 aa)
	AJR04171.1	beta-N-acetylglucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (968 aa)

Your Current Organism:

Siansivirga zeaxanthinifaciens

NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR03228.1	AJR03727.1	AW14_05775	AW14_08910	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
AJR03228.1	AJR04485.1	AW14_05775	AW14_13300	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AJR03228.1	AJR04492.1	AW14_05775	AW14_13345	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
AJR03228.1	AJR04532.1	AW14_05775	AW14_13705	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.719
AJR03727.1	AJR03228.1	AW14_08910	AW14_05775	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.703
AJR03727.1	AJR04485.1	AW14_08910	AW14_13300	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AJR03727.1	AJR04492.1	AW14_08910	AW14_13345	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR03727.1	AJR04532.1	AW14_08910	AW14_13705	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR04485.1	AJR03228.1	AW14_13300	AW14_05775	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.736
AJR04485.1	AJR03727.1	AW14_13300	AW14_08910	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AJR04485.1	AJR04492.1	AW14_13300	AW14_13345	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
AJR04485.1	AJR04532.1	AW14_13300	AW14_13705	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AJR04492.1	AJR03228.1	AW14_13345	AW14_05775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.709
AJR04492.1	AJR03727.1	AW14_13345	AW14_08910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR04492.1	AJR04485.1	AW14_13345	AW14_13300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
AJR04492.1	AJR04532.1	AW14_13345	AW14_13705	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
AJR04532.1	AJR03228.1	AW14_13705	AW14_05775	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.	0.719
AJR04532.1	AJR03727.1	AW14_13705	AW14_08910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR04532.1	AJR04485.1	AW14_13705	AW14_13300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AJR04532.1	AJR04492.1	AW14_13705	AW14_13345	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710