Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJR02275.1 | AJR02708.1 | AW14_00025 | AW14_02645 | Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AJR02275.1 | AJR02820.1 | AW14_00025 | AW14_03365 | Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AJR02286.1 | AJR02708.1 | AW14_00140 | AW14_02645 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| AJR02286.1 | AJR02820.1 | AW14_00140 | AW14_03365 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| AJR02286.1 | AJR03332.1 | AW14_00140 | AW14_06350 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AJR02286.1 | ddl | AW14_00140 | AW14_00980 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.697 |
| AJR02286.1 | mraY | AW14_00140 | AW14_00130 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.944 |
| AJR02286.1 | mtgA | AW14_00140 | AW14_04895 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.411 |
| AJR02286.1 | murA | AW14_00140 | AW14_09860 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.740 |
| AJR02286.1 | murB | AW14_00140 | AW14_08485 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.416 |
| AJR02286.1 | murC | AW14_00140 | AW14_00110 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.920 |
| AJR02286.1 | murD | AW14_00140 | AW14_00125 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.951 |
| AJR02286.1 | murE | AW14_00140 | AW14_00135 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.963 |
| AJR02286.1 | murF | AW14_00140 | AW14_01490 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.765 |
| AJR02286.1 | murG | AW14_00140 | AW14_00115 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.871 |
| AJR02708.1 | AJR02275.1 | AW14_02645 | AW14_00025 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AJR02708.1 | AJR02286.1 | AW14_02645 | AW14_00140 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| AJR02708.1 | AJR02820.1 | AW14_02645 | AW14_03365 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.912 |
| AJR02708.1 | AJR03332.1 | AW14_02645 | AW14_06350 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| AJR02708.1 | mtgA | AW14_02645 | AW14_04895 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.432 |
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