(13 nodes) Mostly uncharacterized, incl. Nucleoside recognition, and Periplasmic binding protein network (Nonlabens marinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NMS_0634	Hypothetical protein. (64 aa)
	NMS_0635	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (703 aa)
	NMS_0636	Hypothetical protein. (76 aa)
	NMS_0638	Hypothetical protein. (264 aa)
	NMS_2560	Vitamin B12 ABC transporter, B12-binding component BtuF. (372 aa)
	NMS_2561	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (274 aa)
	NMS_2562	iron(III) ABC transporter, ATP-binding protein, putative. (254 aa)
	NMS_2563	DNA recombination protein RmuC. (485 aa)
	NMS_2564	Hypothetical protein. (208 aa)
	NMS_2565	Hypothetical protein. (39 aa)
	NMS_2566	Hypothetical protein. (172 aa)
	NMS_2567	Hypothetical protein. (122 aa)
	NMS_2569	Acyl CoA thioester hydrolase family protein. (181 aa)

Your Current Organism:

Nonlabens marinus

NCBI taxonomy Id: 1454201
Other names: Flavobacteria bacterium S1-08, N. marinus S1-08, Nonlabens marinus S1-08

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NMS_0634	NMS_0635	Hypothetical protein.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.798
NMS_0634	NMS_0636	Hypothetical protein.	Hypothetical protein.	0.799
NMS_0635	NMS_0634	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Hypothetical protein.	0.798
NMS_0635	NMS_0636	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	Hypothetical protein.	0.991
NMS_0636	NMS_0634	Hypothetical protein.	Hypothetical protein.	0.799
NMS_0636	NMS_0635	Hypothetical protein.	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.	0.991
NMS_2560	NMS_2561	Vitamin B12 ABC transporter, B12-binding component BtuF.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.994
NMS_2560	NMS_2562	Vitamin B12 ABC transporter, B12-binding component BtuF.	iron(III) ABC transporter, ATP-binding protein, putative.	0.990
NMS_2560	NMS_2563	Vitamin B12 ABC transporter, B12-binding component BtuF.	DNA recombination protein RmuC.	0.442
NMS_2561	NMS_2560	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Vitamin B12 ABC transporter, B12-binding component BtuF.	0.994
NMS_2561	NMS_2562	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	iron(III) ABC transporter, ATP-binding protein, putative.	0.999
NMS_2561	NMS_2563	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	DNA recombination protein RmuC.	0.611
NMS_2561	NMS_2564	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein.	0.415
NMS_2562	NMS_2560	iron(III) ABC transporter, ATP-binding protein, putative.	Vitamin B12 ABC transporter, B12-binding component BtuF.	0.990
NMS_2562	NMS_2561	iron(III) ABC transporter, ATP-binding protein, putative.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.999
NMS_2562	NMS_2563	iron(III) ABC transporter, ATP-binding protein, putative.	DNA recombination protein RmuC.	0.639
NMS_2562	NMS_2564	iron(III) ABC transporter, ATP-binding protein, putative.	Hypothetical protein.	0.419
NMS_2563	NMS_2560	DNA recombination protein RmuC.	Vitamin B12 ABC transporter, B12-binding component BtuF.	0.442
NMS_2563	NMS_2561	DNA recombination protein RmuC.	Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.611
NMS_2563	NMS_2562	DNA recombination protein RmuC.	iron(III) ABC transporter, ATP-binding protein, putative.	0.639