STRINGSTRING
xerC xerC NMS_0270 NMS_0270 NMS_0350 NMS_0350 NMS_0351 NMS_0351 NMS_0533 NMS_0533 NMS_0622 NMS_0622 NMS_0643 NMS_0643 NMS_0888 NMS_0888 NMS_0992 NMS_0992 tadA tadA NMS_1265 NMS_1265 NMS_1310 NMS_1310 NMS_1313 NMS_1313 NMS_1589 NMS_1589 xerC-2 xerC-2 NMS_1612 NMS_1612 NMS_1638 NMS_1638 NMS_1639 NMS_1639 NMS_1702 NMS_1702 NMS_1715 NMS_1715 NMS_1995 NMS_1995 NMS_2017 NMS_2017 NMS_2055 NMS_2055 NMS_2072 NMS_2072 NMS_2079 NMS_2079 NMS_2122 NMS_2122 NMS_2228 NMS_2228 proC proC proB proB proA proA NMS_2413 NMS_2413 NMS_2446 NMS_2446
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xerCIntegrase, site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (291 aa)
NMS_0270Aspartate aminotransferase. (396 aa)
NMS_0350Biosynthetic arginine decarboxylase. (463 aa)
NMS_0351Agmatinase; Belongs to the arginase family. (312 aa)
NMS_0533Oxidoreductase. (371 aa)
NMS_0622Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family. (517 aa)
NMS_0643Putative preQ0 transporter; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. (181 aa)
NMS_0888Succinylglutamate desuccinylase. (325 aa)
NMS_0992Tyrosine type site-specific recombinase; Belongs to the 'phage' integrase family. (399 aa)
tadAtRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (149 aa)
NMS_1265Phage integrase family protein; Belongs to the 'phage' integrase family. (404 aa)
NMS_1310Aspartate aminotransferase. (395 aa)
NMS_1313Delta-1-pyrroline-5-carboxylate dehydrogenase. (542 aa)
NMS_1589Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (424 aa)
xerC-2Integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (281 aa)
NMS_1612Hypothetical protein. (54 aa)
NMS_1638Hypothetical protein. (64 aa)
NMS_1639Hypothetical protein. (41 aa)
NMS_1702Amidase family protein. (555 aa)
NMS_1715Excinuclease ABC, C subunit-like. (102 aa)
NMS_1995Integrase; Belongs to the 'phage' integrase family. (364 aa)
NMS_2017Acetyltransferase. (173 aa)
NMS_2055Probable integrase; Belongs to the 'phage' integrase family. (282 aa)
NMS_2072Amine oxidase, flavin-containing. (349 aa)
NMS_2079Transposase; Belongs to the 'phage' integrase family. (425 aa)
NMS_2122Tyrosine type site-specific recombinase. (105 aa)
NMS_2228Carbapenem antibiotics biosynthesis protein carD. (389 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (266 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (275 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (399 aa)
NMS_2413Hypothetical protein. (203 aa)
NMS_2446Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (457 aa)
Your Current Organism:
Nonlabens marinus
NCBI taxonomy Id: 1454201
Other names: Flavobacteria bacterium S1-08, N. marinus S1-08, Nonlabens marinus S1-08
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