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icd icd sucA sucA sucB sucB SRAA_0982 SRAA_0982 SRAA_1085 SRAA_1085 pdhC pdhC aceE aceE SRAA_1170 SRAA_1170 acnB acnB mdh mdh SRAA_1686 SRAA_1686 SRAA_1687 SRAA_1687 sdhA sdhA sdhB sdhB gltA gltA sucC sucC sucD sucD maeB maeB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
icdIsocitrate dehydrogenase; Identified by MetaGeneAnnotator; putative. (417 aa)
sucA2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component, and related enzymes; Identified by MetaGeneAnnotator; putative. (959 aa)
sucBDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (420 aa)
SRAA_0982Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (479 aa)
SRAA_1085Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (611 aa)
pdhCAcetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (442 aa)
aceEPyruvate dehydrogenase complex, dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (905 aa)
SRAA_1170Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (516 aa)
acnBIdentified by MetaGeneAnnotator; putative; Belongs to the aconitase/IPM isomerase family. (863 aa)
mdhMalate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (328 aa)
SRAA_1686Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; Identified by MetaGeneAnnotator; putative. (144 aa)
SRAA_1687Succinate dehydrogenase, hydrophobic anchor subunit; Identified by MetaGeneAnnotator; putative. (121 aa)
sdhASuccinate dehydrogenase/fumarate reductase, flavoprotein subunit; Identified by MetaGeneAnnotator; putative; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (603 aa)
sdhBSuccinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Identified by MetaGeneAnnotator; putative. (234 aa)
gltACitrate synthase; Identified by MetaGeneAnnotator; putative; Belongs to the citrate synthase family. (436 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (391 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (297 aa)
maeBMalic enzyme; Identified by MetaGeneAnnotator; putative. (798 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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