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SRAA_1353 SRAA_1353 SRAA_0221 SRAA_0221 SRAA_0584 SRAA_0584 boxB boxB SRAA_0665 SRAA_0665 SRAA_0876 SRAA_0876 edd edd sucB sucB SRAA_0986 SRAA_0986 SRAA_1066 SRAA_1066 SRAA_1067 SRAA_1067 dfp dfp SRAA_1178 SRAA_1178 SRAA_1205 SRAA_1205 SRAA_1208 SRAA_1208 SRAA_1317 SRAA_1317 SRAA_1350 SRAA_1350 SRAA_1352 SRAA_1352 SRAA_1359 SRAA_1359 SRAA_1361 SRAA_1361 SRAA_1418 SRAA_1418 gcvH gcvH gcvP gcvP gcdH1 gcdH1 SRAA_1489 SRAA_1489 SRAA_1631 SRAA_1631 SRAA_1817 SRAA_1817 SRAA_1821 SRAA_1821 SRAA_1901 SRAA_1901 SRAA_1903 SRAA_1903 anmK anmK SRAA_2047 SRAA_2047 SRAA_2138 SRAA_2138 SRAA_2160 SRAA_2160 paaI paaI SRAA_2162 SRAA_2162 paaA paaA paaK paaK SRAA_2165 SRAA_2165 SRAA_2166 SRAA_2166 SRAA_2199 SRAA_2199 SRAA_2239 SRAA_2239
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_1353Demethylmenaquinone methyltransferase; Identified by MetaGeneAnnotator; putative. (227 aa)
SRAA_0221Isopropylmalate/homocitrate/citramalate synthase; Identified by MetaGeneAnnotator; putative. (305 aa)
SRAA_0584benzoyl-CoA-dihydrodiol lyase; Identified by MetaGeneAnnotator; putative. (560 aa)
boxBbenzoyl-CoA oxygenase, component B; Identified by MetaGeneAnnotator; putative. (475 aa)
SRAA_0665acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (420 aa)
SRAA_0876glycine/D-amino acid oxidase (deaminating); Identified by MetaGeneAnnotator; putative. (414 aa)
eddDihydroxyacid dehydratase/phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (612 aa)
sucBDihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (420 aa)
SRAA_0986Predicted thioesterase; Identified by MetaGeneAnnotator; putative. (149 aa)
SRAA_1066Hypothetical protein; Identified by MetaGeneAnnotator; putative. (283 aa)
SRAA_10673-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); Identified by MetaGeneAnnotator; putative. (127 aa)
dfpPhosphopantothenoylcysteine synthetase/decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (405 aa)
SRAA_1178glycine/D-amino acid oxidase (deaminating); Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. (386 aa)
SRAA_1205Activator of 2-hydroxyglutaryl-CoA dehydratase; HSP70-class ATPase domain; identified by MetaGeneAnnotator; putative. (732 aa)
SRAA_12083-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (704 aa)
SRAA_1317acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (610 aa)
SRAA_1350Hypothetical protein; Identified by MetaGeneAnnotator; putative. (292 aa)
SRAA_1352Predicted metal-dependent hydrolase of the TIM-barrel fold; Identified by MetaGeneAnnotator; putative. (309 aa)
SRAA_13592-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; Identified by MetaGeneAnnotator; putative. (441 aa)
SRAA_13612-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; Identified by MetaGeneAnnotator; putative. (542 aa)
SRAA_1418Glycine cleavage system T protein; Aminomethyltransferase; identified by MetaGeneAnnotator; putative. (394 aa)
gcvHGlycine cleavage system H protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (121 aa)
gcvPGlycine cleavage system protein P (pyridoxal-binding), C-terminal domain; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (992 aa)
gcdH1acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (395 aa)
SRAA_14893-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (683 aa)
SRAA_1631Diadenosine tetraphosphate Ap4A hydrolase and other HIT family hydrolase; Identified by MetaGeneAnnotator; putative. (119 aa)
SRAA_1817acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (378 aa)
SRAA_1821acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (401 aa)
SRAA_19013-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (810 aa)
SRAA_1903acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (598 aa)
anmKPredicted molecular chaperone distantly related to HSP70-fold metalloprotease; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (378 aa)
SRAA_2047Coenzyme F390 synthetase; Identified by MetaGeneAnnotator; putative. (425 aa)
SRAA_2138glycine/D-amino acid oxidase (deaminating); Identified by MetaGeneAnnotator; putative. (425 aa)
SRAA_2160Predicted metal-sulfur cluster biosynthetic enzyme; Identified by MetaGeneAnnotator; putative. (184 aa)
paaIUncharacterized conserved protein; Identified by MetaGeneAnnotator; putative. (265 aa)
SRAA_2162Uncharacterized enzyme of phenylacetate metabolism; Identified by MetaGeneAnnotator; putative. (99 aa)
paaAUncharacterized conserved protein; Identified by MetaGeneAnnotator; putative. (336 aa)
paaKCoenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (441 aa)
SRAA_2165Uncharacterized protein, possibly involved in aromatic compounds catabolism; Identified by MetaGeneAnnotator; putative. (164 aa)
SRAA_2166Phenylacetic acid-responsive transcriptional repressor; Identified by MetaGeneAnnotator; putative. (319 aa)
SRAA_2199Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Identified by MetaGeneAnnotator; putative; Belongs to the arginase family. (318 aa)
SRAA_22392-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; Identified by MetaGeneAnnotator; putative. (233 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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