STRINGSTRING
SRAA_0219 SRAA_0219 SRAA_0224 SRAA_0224 carB carB SRAA_0977 SRAA_0977 accC accC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_0219Biotin carboxylase; Identified by MetaGeneAnnotator; putative. (1208 aa)
SRAA_0224acetyl/propionyl-CoA carboxylase, alpha subunit; Identified by MetaGeneAnnotator; putative. (675 aa)
carBCarbamoylphosphate synthase large subunit; Identified by MetaGeneAnnotator; putative; split gene in MJ; Belongs to the CarB family. (1097 aa)
SRAA_0977acetyl/propionyl-CoA carboxylase, alpha subunit; Identified by MetaGeneAnnotator; putative. (697 aa)
accCBiotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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