STRINGSTRING
paaG paaG SRAA_1901 SRAA_1901 SRAA_1898 SRAA_1898 paaG-2 paaG-2 SRAA_1885 SRAA_1885 accD accD SRAA_1489 SRAA_1489 SRAA_1365 SRAA_1365 accA accA SRAA_1208 SRAA_1208 SRAA_1141 SRAA_1141 SRAA_0974 SRAA_0974 SRAA_0838 SRAA_0838 SRAA_0668 SRAA_0668 clpP clpP SRAA_0584 SRAA_0584 SRAA_0578 SRAA_0578 SRAA_0226 SRAA_0226
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
paaGenoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative. (259 aa)
SRAA_19013-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (810 aa)
SRAA_1898enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative. (254 aa)
paaG-2enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
SRAA_1885enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
accDacetyl-CoA carboxylase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (292 aa)
SRAA_14893-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (683 aa)
SRAA_1365enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative. (267 aa)
accAacetyl-CoA carboxylase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (336 aa)
SRAA_12083-hydroxyacyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (704 aa)
SRAA_1141Periplasmic serine protease ClpP class; Identified by MetaGeneAnnotator; putative. (321 aa)
SRAA_0974acetyl-CoA carboxylase, carboxyltransferase component, subunits alpha and beta; Identified by MetaGeneAnnotator; putative. (510 aa)
SRAA_0838Periplasmic protease; Identified by MetaGeneAnnotator; putative; Belongs to the peptidase S41A family. (488 aa)
SRAA_0668enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
clpPProtease subunit of ATP-dependent Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (203 aa)
SRAA_0584benzoyl-CoA-dihydrodiol lyase; Identified by MetaGeneAnnotator; putative. (560 aa)
SRAA_0578enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (265 aa)
SRAA_0226acetyl-CoA carboxylase, carboxyltransferase component, subunits alpha and beta; Identified by MetaGeneAnnotator; putative. (535 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.