STRINGSTRING
SRAA_1903 SRAA_1903 SRAA_1817 SRAA_1817 gcdH1 gcdH1 SRAA_1774 SRAA_1774 SRAA_1317 SRAA_1317 SRAA_0665 SRAA_0665 SRAA_1821 SRAA_1821
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_1903acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (598 aa)
SRAA_1817acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (378 aa)
gcdH1acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (395 aa)
SRAA_1774acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (393 aa)
SRAA_1317acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (610 aa)
SRAA_0665acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (420 aa)
SRAA_1821acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (401 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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