STRINGSTRING
SRAA_1787 SRAA_1787 SRAA_0298 SRAA_0298 SRAA_0546 SRAA_0546 phbB phbB SRAA_0705 SRAA_0705 SRAA_0814 SRAA_0814 SRAA_1057 SRAA_1057 SRAA_1598 SRAA_1598 SRAA_1600 SRAA_1600 fabG fabG SRAA_1750 SRAA_1750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_1787Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative. (264 aa)
SRAA_0298Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative. (254 aa)
SRAA_0546Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
phbBDehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
SRAA_0705Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
SRAA_0814Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative. (245 aa)
SRAA_1057Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
SRAA_1598Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
SRAA_1600Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative. (263 aa)
fabGDehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
SRAA_1750Dehydrogenase with different specificities related to short-chain alcohol dehydrogenase; Identified by MetaGeneAnnotator; putative. (276 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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