STRINGSTRING
glmS glmS SRAA_0278 SRAA_0278 gltD gltD SRAA_0677 SRAA_0677 purA purA carA carA carB carB SRAA_0760 SRAA_0760 SRAA_0764 SRAA_0764 SRAA_0952 SRAA_0952 nadB nadB gabT gabT gabD3 gabD3 purF purF SRAA_1486 SRAA_1486 pyrB pyrB SRAA_1916 SRAA_1916 argH argH purB purB SRAA_2194 SRAA_2194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glmSGlucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (637 aa)
SRAA_0278Glutamate synthase domain 2; Identified by MetaGeneAnnotator; putative. (1581 aa)
gltDNADPH-dependent glutamate synthase beta chain and related oxidoreductase; Identified by MetaGeneAnnotator; putative. (491 aa)
SRAA_0677Glutamate dehydrogenase/leucine dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (462 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (471 aa)
carACarbamoylphosphate synthase small subunit; Identified by MetaGeneAnnotator; putative; Belongs to the CarA family. (390 aa)
carBCarbamoylphosphate synthase large subunit; Identified by MetaGeneAnnotator; putative; split gene in MJ; Belongs to the CarB family. (1097 aa)
SRAA_0760Glutamate dehydrogenase/leucine dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (441 aa)
SRAA_0764Aspartate/tyrosine/aromatic aminotransferase; Identified by MetaGeneAnnotator; putative. (412 aa)
SRAA_0952L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Identified by MetaGeneAnnotator; putative. (357 aa)
nadBAspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (544 aa)
gabT4-aminobutyrate aminotransferase and related aminotransferase; Identified by MetaGeneAnnotator; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
gabD3NAD-dependent aldehyde dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the aldehyde dehydrogenase family. (496 aa)
purFGlutamine phosphoribosylpyrophosphate amidotransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (501 aa)
SRAA_1486Argininosuccinate synthase; Identified by MetaGeneAnnotator; putative; Belongs to the argininosuccinate synthase family. Type 2 subfamily. (442 aa)
pyrBAspartate carbamoyltransferase, catalytic chain; Identified by MetaGeneAnnotator; putative; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (317 aa)
SRAA_1916Glutamine synthetase; Identified by MetaGeneAnnotator; putative. (471 aa)
argHArgininosuccinate lyase; Identified by MetaGeneAnnotator; putative. (494 aa)
purBAdenylosuccinate lyase; Identified by MetaGeneAnnotator; putative; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (498 aa)
SRAA_2194Glutamine synthetase; Identified by MetaGeneAnnotator; putative; Belongs to the glutamine synthetase family. (455 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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