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SRAA_0088 SRAA_0088 SRAA_0221 SRAA_0221 SRAA_0224 SRAA_0224 paaG paaG SRAA_0226 SRAA_0226 ilvE ilvE SRAA_0576 SRAA_0576 atoB atoB SRAA_0665 SRAA_0665 SRAA_0970 SRAA_0970 SRAA_0974 SRAA_0974 SRAA_0977 SRAA_0977 SRAA_0982 SRAA_0982 SRAA_1085 SRAA_1085 SRAA_1207 SRAA_1207 iolA iolA gabT gabT SRAA_1488 SRAA_1488 scoB scoB scoA scoA SRAA_1791 SRAA_1791 SRAA_1817 SRAA_1817 SRAA_1818 SRAA_1818 SRAA_1821 SRAA_1821 paaG-2 paaG-2 fadA fadA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_00883-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; Identified by MetaGeneAnnotator; putative. (300 aa)
SRAA_0221Isopropylmalate/homocitrate/citramalate synthase; Identified by MetaGeneAnnotator; putative. (305 aa)
SRAA_0224acetyl/propionyl-CoA carboxylase, alpha subunit; Identified by MetaGeneAnnotator; putative. (675 aa)
paaGenoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative. (259 aa)
SRAA_0226acetyl-CoA carboxylase, carboxyltransferase component, subunits alpha and beta; Identified by MetaGeneAnnotator; putative. (535 aa)
ilvEBranched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (325 aa)
SRAA_0576acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
atoBacetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
SRAA_0665acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (420 aa)
SRAA_0970methylmalonyl-CoA mutase, N-terminal domain/subunit; Identified by MetaGeneAnnotator; putative. (715 aa)
SRAA_0974acetyl-CoA carboxylase, carboxyltransferase component, subunits alpha and beta; Identified by MetaGeneAnnotator; putative. (510 aa)
SRAA_0977acetyl/propionyl-CoA carboxylase, alpha subunit; Identified by MetaGeneAnnotator; putative. (697 aa)
SRAA_0982Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (479 aa)
SRAA_1085Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (611 aa)
SRAA_1207acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
iolANAD-dependent aldehyde dehydrogenase; Identified by MetaGeneAnnotator; putative. (500 aa)
gabT4-aminobutyrate aminotransferase and related aminotransferase; Identified by MetaGeneAnnotator; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
SRAA_1488acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
scoBAcyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; Identified by MetaGeneAnnotator; putative. (212 aa)
scoAAcyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; Identified by MetaGeneAnnotator; putative. (234 aa)
SRAA_1791acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
SRAA_1817acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (378 aa)
SRAA_1818acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
SRAA_1821acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (401 aa)
paaG-2enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
fadAacetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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