12 items (Serpentinomonas raichei) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Predicted Interactions

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Your Input:
	SRAA_0576	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
	atoB	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
	sucB	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (420 aa)
	SRAA_0982	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (479 aa)
	SRAA_1085	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (611 aa)
	SRAA_1207	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	gabT	4-aminobutyrate aminotransferase and related aminotransferase; Identified by MetaGeneAnnotator; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
	gabD3	NAD-dependent aldehyde dehydrogenase; Identified by MetaGeneAnnotator; putative; Belongs to the aldehyde dehydrogenase family. (496 aa)
	gcdH1	acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (395 aa)
	SRAA_1791	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
	SRAA_1818	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	paaG-2	enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)

Your Current Organism:

Serpentinomonas raichei

NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRAA_0576	SRAA_1207	SRAA_0576	SRAA_1207	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.683
SRAA_0576	SRAA_1791	SRAA_0576	SRAA_1791	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.656
SRAA_0576	SRAA_1818	SRAA_0576	SRAA_1818	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.690
SRAA_0576	atoB	SRAA_0576	SRAA_0593	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.670
SRAA_0576	gcdH1	SRAA_0576	SRAA_1487	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.421
SRAA_0576	paaG-2	SRAA_0576	SRAA_1886	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family.	0.606
SRAA_0576	sucB	SRAA_0576	SRAA_0981	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).	0.808
SRAA_0982	SRAA_1085	SRAA_0982	SRAA_1085	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.979
SRAA_0982	gcdH1	SRAA_0982	SRAA_1487	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.903
SRAA_0982	sucB	SRAA_0982	SRAA_0981	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).	0.998
SRAA_1085	SRAA_0982	SRAA_1085	SRAA_0982	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.979
SRAA_1085	gcdH1	SRAA_1085	SRAA_1487	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.923
SRAA_1085	sucB	SRAA_1085	SRAA_0981	Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative.	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).	0.987
SRAA_1207	SRAA_0576	SRAA_1207	SRAA_0576	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.683
SRAA_1207	SRAA_1791	SRAA_1207	SRAA_1791	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.667
SRAA_1207	SRAA_1818	SRAA_1207	SRAA_1818	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.673
SRAA_1207	atoB	SRAA_1207	SRAA_0593	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	0.652
SRAA_1207	gcdH1	SRAA_1207	SRAA_1487	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative.	0.698
SRAA_1207	paaG-2	SRAA_1207	SRAA_1886	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family.	0.606
SRAA_1207	sucB	SRAA_1207	SRAA_0981	acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family.	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).	0.808