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SRAA_0576 SRAA_0576 atoB atoB SRAA_0970 SRAA_0970 SRAA_0974 SRAA_0974 SRAA_0977 SRAA_0977 SRAA_0982 SRAA_0982 SRAA_1085 SRAA_1085 SRAA_1154 SRAA_1154 acs acs SRAA_1207 SRAA_1207 iolA iolA accA accA prpE prpE gabT gabT accC accC bccP bccP acnB acnB accD accD SRAA_1791 SRAA_1791 SRAA_1817 SRAA_1817 SRAA_1818 SRAA_1818 sucC sucC sucD sucD paaG-2 paaG-2 SRAA_2122 SRAA_2122 ackA ackA SRAA_2210 SRAA_2210 SRAA_2354 SRAA_2354
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRAA_0576acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
atoBacetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
SRAA_0970methylmalonyl-CoA mutase, N-terminal domain/subunit; Identified by MetaGeneAnnotator; putative. (715 aa)
SRAA_0974acetyl-CoA carboxylase, carboxyltransferase component, subunits alpha and beta; Identified by MetaGeneAnnotator; putative. (510 aa)
SRAA_0977acetyl/propionyl-CoA carboxylase, alpha subunit; Identified by MetaGeneAnnotator; putative. (697 aa)
SRAA_0982Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (479 aa)
SRAA_1085Dihydrolipoyl dehydrogenase; Identified by MetaGeneAnnotator; putative. (611 aa)
SRAA_1154Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; Identified by MetaGeneAnnotator; putative. (619 aa)
acsAcyl-coenzyme A synthetase/AMP-(fatty) acid ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (664 aa)
SRAA_1207acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
iolANAD-dependent aldehyde dehydrogenase; Identified by MetaGeneAnnotator; putative. (500 aa)
accAacetyl-CoA carboxylase alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (336 aa)
prpEAcyl-coenzyme A synthetase/AMP-(fatty) acid ligase; Identified by MetaGeneAnnotator; putative. (639 aa)
gabT4-aminobutyrate aminotransferase and related aminotransferase; Identified by MetaGeneAnnotator; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
accCBiotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
bccPBiotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (157 aa)
acnBIdentified by MetaGeneAnnotator; putative; Belongs to the aconitase/IPM isomerase family. (863 aa)
accDacetyl-CoA carboxylase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (292 aa)
SRAA_1791acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
SRAA_1817acyl-CoA dehydrogenase; Identified by MetaGeneAnnotator; putative. (378 aa)
SRAA_1818acetyl-CoA acetyltransferase; Identified by MetaGeneAnnotator; putative; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (391 aa)
sucDsuccinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (297 aa)
paaG-2enoyl-CoA hydratase/carnithine racemase; Identified by MetaGeneAnnotator; putative; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
SRAA_2122Threonine dehydrogenase and related Zn-dependent dehydrogenase; Identified by MetaGeneAnnotator; putative. (365 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (408 aa)
SRAA_2210Phosphotransacetylase; Identified by MetaGeneAnnotator; putative. (496 aa)
SRAA_2354Phosphotransacetylase; Identified by MetaGeneAnnotator; putative. (477 aa)
Your Current Organism:
Serpentinomonas raichei
NCBI taxonomy Id: 1458425
Other names: Comamonadaceae bacterium A1, Comamonadaceae bacterium H1, S. raichei, strain A1
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