(14 nodes) Mixed, incl. Archaeal-type flagellum, and Type II/IV secretion system protein network (Nitrososphaera evergladensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NTE_02352	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein. (559 aa)
	NTE_02353	PFAM: Sugar-specific transcriptional regulator TrmB. (335 aa)
	NTE_02354	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (218 aa)
	NTE_02355	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (230 aa)
	NTE_02356	Hypothetical protein. (509 aa)
	NTE_02357	PFAM: Archaebacterial flagellin. (156 aa)
	NTE_02358	Hypothetical protein. (179 aa)
	NTE_02359	Putative ATPase involved in flagella biogenesis; PFAM: KaiC. (234 aa)
	NTE_02360	Archaeal flagella assembly protein J; PFAM: Type II secretion system (T2SS), protein F. (500 aa)
	NTE_02361	Hypothetical protein. (94 aa)
	NTE_02362	Hypothetical protein. (97 aa)
	NTE_02363	RecA-superfamily ATPase possibly involved in signal transduction; PFAM: KaiC. (261 aa)
	NTE_02364	Hypothetical protein. (269 aa)
	NTE_02365	Hypothetical protein. (131 aa)

Your Current Organism:

Nitrososphaera evergladensis

NCBI taxonomy Id: 1459636
Other names: C. Nitrososphaera evergladensis SR1, Candidatus Nitrososphaera evergladensis SR1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NTE_02352	NTE_02353	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	PFAM: Sugar-specific transcriptional regulator TrmB.	0.573
NTE_02352	NTE_02354	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	0.578
NTE_02352	NTE_02355	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	0.516
NTE_02352	NTE_02357	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	PFAM: Archaebacterial flagellin.	0.866
NTE_02352	NTE_02358	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	Hypothetical protein.	0.736
NTE_02352	NTE_02359	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	Putative ATPase involved in flagella biogenesis; PFAM: KaiC.	0.939
NTE_02352	NTE_02360	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	Archaeal flagella assembly protein J; PFAM: Type II secretion system (T2SS), protein F.	0.964
NTE_02353	NTE_02352	PFAM: Sugar-specific transcriptional regulator TrmB.	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	0.573
NTE_02353	NTE_02354	PFAM: Sugar-specific transcriptional regulator TrmB.	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	0.531
NTE_02353	NTE_02360	PFAM: Sugar-specific transcriptional regulator TrmB.	Archaeal flagella assembly protein J; PFAM: Type II secretion system (T2SS), protein F.	0.414
NTE_02354	NTE_02352	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	0.578
NTE_02354	NTE_02353	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	PFAM: Sugar-specific transcriptional regulator TrmB.	0.531
NTE_02354	NTE_02356	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	Hypothetical protein.	0.419
NTE_02354	NTE_02357	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	PFAM: Archaebacterial flagellin.	0.542
NTE_02354	NTE_02358	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	Hypothetical protein.	0.531
NTE_02354	NTE_02359	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	Putative ATPase involved in flagella biogenesis; PFAM: KaiC.	0.508
NTE_02354	NTE_02360	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	Archaeal flagella assembly protein J; PFAM: Type II secretion system (T2SS), protein F.	0.515
NTE_02355	NTE_02352	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.	0.516
NTE_02355	NTE_02356	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	Hypothetical protein.	0.744
NTE_02355	NTE_02357	Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.	PFAM: Archaebacterial flagellin.	0.798