STRINGSTRING
NTE_00747 NTE_00747 NTE_00784 NTE_00784 rpl21e rpl21e rpl24e rpl24e NTE_01345 NTE_01345 rpl19e rpl19e rpl32e rpl32e rpl24e-2 rpl24e-2 NTE_01757 NTE_01757 rps19p rps19p NTE_01923 NTE_01923 NTE_02376 NTE_02376 rpl31e rpl31e NTE_02748 NTE_02748 rps19e rps19e
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NTE_00747LSU ribosomal protein L15E; PFAM: Ribosomal L15. (152 aa)
NTE_00784PFAM: Ribosomal protein S24e. (126 aa)
rpl21ePFAM: Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (99 aa)
rpl24eLSU ribosomal protein L24E; Binds to the 23S rRNA. (70 aa)
NTE_01345PFAM: Ribosomal L37ae protein family. (77 aa)
rpl19eRibosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (149 aa)
rpl32ePFAM: Ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (144 aa)
rpl24e-2LSU ribosomal protein L24E; Binds to the 23S rRNA. (80 aa)
NTE_01757PFAM: Ribosomal S3Ae family. (236 aa)
rps19pSSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (135 aa)
NTE_01923PFAM: Ribosomal protein S26e. (100 aa)
NTE_02376Ribosomal protein S17E; PFAM: Ribosomal S17. (83 aa)
rpl31ePFAM: Ribosomal protein L31e; Belongs to the ribosomal protein L31e family. (126 aa)
NTE_02748PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family. (104 aa)
rps19eSSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (151 aa)
Your Current Organism:
Nitrososphaera evergladensis
NCBI taxonomy Id: 1459636
Other names: C. Nitrososphaera evergladensis SR1, Candidatus Nitrososphaera evergladensis SR1
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