STRINGSTRING
NTE_01958 NTE_01958 NTE_00039 NTE_00039 NTE_00834 NTE_00834 NTE_01552 NTE_01552 NTE_03263 NTE_03263
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NTE_01958PFAM: DNA methylase. (292 aa)
NTE_00039PFAM: Development and cell death domain; DNA methylase. (397 aa)
NTE_00834PFAM: DNA methylase. (340 aa)
NTE_01552PFAM: DNA methylase. (313 aa)
NTE_03263PFAM: DNA methylase. (282 aa)
Your Current Organism:
Nitrososphaera evergladensis
NCBI taxonomy Id: 1459636
Other names: C. Nitrososphaera evergladensis SR1, Candidatus Nitrososphaera evergladensis SR1
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