STRINGSTRING
rplV rplV recO recO sseB sseB hda hda SBA10574.1 SBA10574.1 rplY rplY nifJ nifJ SBA00855.1 SBA00855.1 cutC cutC edd edd rpmI rpmI rplT rplT himA himA nth nth rsxC rsxC sra sra SAZ76845.1 SAZ76845.1 yedK yedK fccA fccA SAZ69739.1 SAZ69739.1 SAZ68996.1 SAZ68996.1 SAZ68556.1 SAZ68556.1 topB topB SAZ59122.1 SAZ59122.1 recQ recQ rep rep SAM67562.1 SAM67562.1 SAZ52153.1 SAZ52153.1 cobB cobB rpmF rpmF yccR yccR ycbG ycbG ihfB ihfB rpsA rpsA ycaJ ycaJ ybiI ybiI recR recR ybaB ybaB priC priC ykgM ykgM hupB hupB eutB eutB eutC eutC SAM66661.1 SAM66661.1 rpsB rpsB SAM63455.1 SAM63455.1 SAM63421.1 SAM63421.1 stiP stiP SAM62454.1 SAM62454.1 SAM62076.1 SAM62076.1 rplI rplI rpsR rpsR rpsF rpsF SAZ15056.1 SAZ15056.1 dnaB dnaB SAM59964.1 SAM59964.1 SAM59956.1 SAM59956.1 sopB sopB rpsT rpsT dnaT dnaT dnaC dnaC cchA-5 cchA-5 cchA-4 cchA-4 cchA-3 cchA-3 adhE adhE ccmK2 ccmK2 pduL-2 pduL-2 rbbA rbbA dnaA dnaA recF recF ttk ttk yicR yicR rpmB rpmB rpmG rpmG SAY96159.1 SAY96159.1 SAY96136.1 SAY96136.1 bcsC bcsC rpsL rpsL rpsG rpsG rpsJ rpsJ rplC rplC rplD rplD rplW rplW rplB rplB rpsS rpsS rpsC rpsC rplP rplP rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsN rpsN rpsH rpsH rplF rplF rplR rplR rpsE rpsE rpmD rpmD rplO rplO rpsM rpsM rpsK rpsK rpsD rpsD rplQ rplQ yrdD yrdD fis fis mreB mreB rng rng rplM rplM rpsI rpsI sspB sspB rplU rplU rpmA rpmA infB infB rpsO rpsO yraO yraO dnaG dnaG rpsU rpsU hupA hupA rplL rplL rplJ rplJ rplA rplA rplK rplK priA priA pduV pduV ypfE ypfE SAY67435.1 SAY67435.1 SAY67413.1 SAY67413.1 SAY67391.1 SAY67391.1 eutE eutE SAY67321.1 SAY67321.1 cchB cchB SAY67266.1 SAY67266.1 pduL pduL SAY67198.1 SAY67198.1 cchA-2 cchA-2 SAY67152.1 SAY67152.1 ddrA ddrA pduE pduE pduD pduD pduC pduC pduB pduB cchA cchA SAM57048.1 SAM57048.1 dtd dtd SAY56423.1 SAY56423.1 recN recN rpsP rpsP rplS rplS yfiA yfiA
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa)
recOGap repair protein; Involved in DNA repair and RecF pathway recombination. (245 aa)
sseBRhodanase-like enzyme, sulfur transfer from thiosulfate; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (258 aa)
hdaATPase regulatory factor involved in DnaA inactivation; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily. (225 aa)
SBA10574.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (322 aa)
rplY50S ribosomal subunit protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (94 aa)
nifJPyruvate-flavodoxin oxidoreductase. (1171 aa)
SBA00855.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (367 aa)
cutCCopper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (247 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa)
rpmI50S ribosomal subunit protein L35; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)
rplT50S ribosomal protein L20, also posttranslational autoregulator; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
himAIntegration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (99 aa)
nthEndonuclease III DNA glycosylase/apyrimidinic (AP) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa)
rsxCPutative 4Fe-4S ferredoxin-type protein fused with unknown protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (753 aa)
sra30S ribosomal subunit protein S22; Function of homologous gene experimentally demonstrated in an other organism; structure. (46 aa)
SAZ76845.1Protein TolA. (142 aa)
yedKHypothetical protein; No homology to any previously reported sequences; Belongs to the SOS response-associated peptidase family. (228 aa)
fccAFlavocytochrome C. (925 aa)
SAZ69739.1Glutathione-dependent formaldehyde-activating, GFA. (146 aa)
SAZ68996.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (243 aa)
SAZ68556.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (41 aa)
topBDNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (648 aa)
SAZ59122.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (550 aa)
recQATP-dependent DNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (608 aa)
repDNA helicase and single-stranded DNA-dependent ATPase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (674 aa)
SAM67562.1DNA methyltransferase. (416 aa)
SAZ52153.1Primosomal protein I. (327 aa)
cobBDeacetylase of acetyl-CoA synthetase, NAD-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the sirtuin family. Class III subfamily. (276 aa)
rpmF50S ribosomal protein L32; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
yccRConserved hypothetical protein; Homologs of previously reported genes of unknown function. (198 aa)
ycbGConserved hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (150 aa)
ihfBIntegration host factor (IHF), DNA-binding protein, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (95 aa)
rpsA30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (557 aa)
ycaJRecombination protein; Function of homologous gene experimentally demonstrated in an other organism; cell process. (447 aa)
ybiIConserved hypothetical protein; Homologs of previously reported genes of unknown function. (88 aa)
recRGap repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa)
ybaBConserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (110 aa)
priCPrimosomal replication protein N'; Function of homologous gene experimentally demonstrated in an other organism; factor. (175 aa)
ykgMPutative ribosomal protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (87 aa)
hupBDNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
eutBEthanolamine ammonia-lyase, large subunit, heavy chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (462 aa)
eutCEthanolamine ammonia-lyase light chain; Belongs to the EutC family. (258 aa)
SAM66661.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (246 aa)
rpsB30S ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. (241 aa)
SAM63455.1Putative ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (352 aa)
SAM63421.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (410 aa)
stiPCysteine protease StiP. (359 aa)
SAM62454.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (334 aa)
SAM62076.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (243 aa)
rplI50S ribosomal subunit protein L9; Binds to the 23S rRNA. (149 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (131 aa)
SAZ15056.1Integral membrane sensor hybrid histidine kinase. (761 aa)
dnaBReplicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (471 aa)
SAM59964.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (493 aa)
SAM59956.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (150 aa)
sopBProtein SopB; Belongs to the ParB family. (323 aa)
rpsTSSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA. (61 aa)
dnaTDNA biosynthesis protein (primosomal protein I); This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'. (179 aa)
dnaCDNA biosynthesis protein; Function of homologous gene experimentally demonstrated in an other organism; cell process. (247 aa)
cchA-5Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (92 aa)
cchA-4Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (94 aa)
cchA-3Ethanolamine utilization polyhedral-body-like protein EutM; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of fused acetaldehyde-CoA dehydrogenase; iron-dependent alcohol dehydrogenase; pyruvate-formate lyase deactivase (part 1). (92 aa)
adhEEthanolamine utilization protein EutN; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of fused acetaldehyde-CoA dehydrogenase; iron-dependent alcohol dehydrogenase; pyruvate-formate lyase deactivase (part 2). (88 aa)
ccmK2Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (132 aa)
pduL-2Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (206 aa)
rbbAFused ribosome-associated ATPase: ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (914 aa)
dnaAChromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (467 aa)
recFGap repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (357 aa)
ttkDivision inhibitor; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (198 aa)
yicRProtein associated with replication fork, possible DNA repair protein; Function of homologous gene experimentally demonstrated in an other organism; cell process; Belongs to the UPF0758 family. YicR subfamily. (221 aa)
rpmB50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmG50S ribosomal protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)
SAY96159.1Cellulose synthase regulator protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. (811 aa)
SAY96136.1Cellulose synthase. (1350 aa)
bcsCCellulose synthase subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1159 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (209 aa)
rplD50S ribosomal protein L4, regulates expression of S10 operon; Forms part of the polypeptide exit tunnel. (201 aa)
rplW50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (232 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa)
rpmC50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uL29 family. (63 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa)
rplX50S ribosomal subunit protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rplR50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (167 aa)
rpmD50S ribosomal protein L30; Function of homologous gene experimentally demonstrated in an other organism; structure. (59 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
rplQ50S ribosomal protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure. (128 aa)
yrdDPutative DNA topoisomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (180 aa)
fisGlobal DNA-binding transcriptional dual regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa)
mreBRod shape-determining protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype. (347 aa)
rngRibonuclease G; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (489 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa)
rpsI30S ribosomal protein S9; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS9 family. (130 aa)
sspBClpXP protease specificity-enhancing factor; Function of homologous gene experimentally demonstrated in an other organism; factor. (164 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa)
rpmA50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (896 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)
yraODnaA initiator-associating factor for replication initiation; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. (196 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (581 aa)
rpsU30S ribosomal protein S21; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS21 family. (71 aa)
hupAHU, DNA-binding transcriptional regulator, alpha subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa)
rplJ50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (165 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (234 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa)
priAPrimosome factor n' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (731 aa)
pduVPropanediol utilization protein PduV; Belongs to the EutP/PduV family. (146 aa)
ypfEPropanediol utilization polyhedral body protein PduU; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (116 aa)
SAY67435.1Polyhedral body protein. (184 aa)
SAY67413.1Polyhedral body protein. (451 aa)
SAY67391.11-propanol dehydrogenase. (370 aa)
eutEPutative aldehyde dehydrogenase, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (464 aa)
SAY67321.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the Cob(I)alamin adenosyltransferase family. (336 aa)
cchBPutative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (91 aa)
SAY67266.1Propanediol utilization protein PduM. (163 aa)
pduLPhosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (210 aa)
SAY67198.1Propanediol utilization protein. (153 aa)
cchA-2Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (91 aa)
SAY67152.1Propanediol dehydratase reactivation factor small subunit. (116 aa)
ddrADiol dehydratase-reactivating factor alpha subunit. (610 aa)
pduEPropanediol dehydratase small subunit. (173 aa)
pduDPropanediol dehydratase medium subunit. (224 aa)
pduCPropanediol dehydratase large subunit. (554 aa)
pduBPropanediol utilization protein PduB. (270 aa)
cchAPutative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (94 aa)
SAM57048.1Lipase. (305 aa)
dtdD-tyr-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
SAY56423.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (242 aa)
recNRecombination and repair protein; May be involved in recombinational repair of damaged DNA. (553 aa)
rpsP30S ribosomal protein S16; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS16 family. (82 aa)
rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa)
yfiACold shock protein associated with 30S ribosomal subunit; Function of homologous gene experimentally demonstrated in an other organism; factor. (125 aa)
Your Current Organism:
Klebsiella quasipneumoniae
NCBI taxonomy Id: 1463164
Other names: CCTCC AB 206144 [[Klebsiella alba]], CIP 110770, DSM 28212, K. quasipneumoniae subsp. similipneumoniae, KCTC 12878 [[Klebsiella alba]], Klebsiella alba, Klebsiella alba Xu et al. 2015, Klebsiella quasipneumoniae subsp. similipneumoniae, Klebsiella quasipneumoniae subsp. similipneumoniae Brisse et al. 2014, Klebsiella sp. 07A044, Klebsiella sp. CW-D, LMG 24441 [[Klebsiella alba]], LMG:24441 [[Klebsiella alba]], strain 07A044, strain CW-D 3 [[Klebsiella alba]], strain SB30
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