STRINGSTRING
xylB xylB ABM69889.1 ABM69889.1 ccmK ccmK rbcL rbcL rbcS rbcS csoS2 csoS2 csoS3 csoS3 ABM69896.1 ABM69896.1 ABM69897.1 ABM69897.1 ABM69898.1 ABM69898.1 prkB prkB ABM71089.1 ABM71089.1 galM galM ABM71091.1 ABM71091.1 kefB kefB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xylBCarbohydrate kinase, FGGY family; COG1070 Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]. (409 aa)
ABM69889.1Conserved hypothetical protein. (256 aa)
ccmKCarboxysome shell protein CsoS1; COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]. (103 aa)
rbcLRibulose bisphosphate carboxylase, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (471 aa)
rbcSCOG4451 Ribulose bisphosphate carboxylase small subunit [Energy production and conversion]. (113 aa)
csoS2Carboxysome shell protein CsoS2. (765 aa)
csoS3Carboxysome shell protein CsoS3. (509 aa)
ABM69896.1COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]. (83 aa)
ABM69897.1COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion]. (82 aa)
ABM69898.1Conserved hypothetical protein. (79 aa)
prkBCOG3954 Phosphoribulokinase [Energy production and conversion]. (298 aa)
ABM71089.1COG3395 Uncharacterized protein conserved in bacteria [Function unknown]. (449 aa)
galMCOG2017 Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]. (284 aa)
ABM71091.1COG596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]. (299 aa)
kefBPutative Na+/H+ antiporter, CPA2 family; COG475 Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]. (455 aa)
Your Current Organism:
Prochlorococcus marinus AS9601
NCBI taxonomy Id: 146891
Other names: P. marinus str. AS9601, Prochlorococcus marinus str. AS9601, Prochlorococcus sp. AS9601
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