STRINGSTRING
AMQ05546.1 AMQ05546.1 AMQ05571.1 AMQ05571.1 hisI hisI ribBA ribBA AMQ05734.1 AMQ05734.1 AMQ05773.1 AMQ05773.1 AMQ05827.1 AMQ05827.1 AMQ08482.1 AMQ08482.1 AMQ08491.1 AMQ08491.1 AMQ06025.1 AMQ06025.1 cdd cdd purU purU AMQ08516.1 AMQ08516.1 AMQ08518.1 AMQ08518.1 AMQ06354.1 AMQ06354.1 AMQ06368.1 AMQ06368.1 AMQ06590.1 AMQ06590.1 AMQ06591.1 AMQ06591.1 nadE nadE AMQ08395.1 AMQ08395.1 AMQ04790.1 AMQ04790.1 AMQ04780.1 AMQ04780.1 AMQ04775.1 AMQ04775.1 AMQ04683.1 AMQ04683.1 AMQ04649.1 AMQ04649.1 AMQ04648.1 AMQ04648.1 AMQ04634.1 AMQ04634.1 AMQ04611.1 AMQ04611.1 AMQ04606.1 AMQ04606.1 kynB kynB AMQ04577.1 AMQ04577.1 ureC ureC ureB ureB ureA ureA pyrG pyrG AMQ08001.1 AMQ08001.1 hutG hutG AMQ08129.1 AMQ08129.1 AMQ08679.1 AMQ08679.1 tadA tadA AMQ07910.1 AMQ07910.1 cheD cheD cheB cheB def-2 def-2 AMQ07290.1 AMQ07290.1 AMQ08650.1 AMQ08650.1 AMQ07842.1 AMQ07842.1 hutI-2 hutI-2 AMQ07793.1 AMQ07793.1 AMQ07788.1 AMQ07788.1 AMQ07729.1 AMQ07729.1 AMQ07728.1 AMQ07728.1 AMQ07707.1 AMQ07707.1 AMQ07703.1 AMQ07703.1 AMQ07702.1 AMQ07702.1 AMQ07685.1 AMQ07685.1 AMQ07645.1 AMQ07645.1 pxpA pxpA AMQ07606.1 AMQ07606.1 folD folD AMQ06718.1 AMQ06718.1 folE folE AMQ06885.1 AMQ06885.1 AMQ06892.1 AMQ06892.1 AMQ07018.1 AMQ07018.1 AMQ07019.1 AMQ07019.1 AMQ07083.1 AMQ07083.1 AMQ07085.1 AMQ07085.1 AMQ08591.1 AMQ08591.1 AMQ08592.1 AMQ08592.1 purH purH purQ purQ AMQ05053.1 AMQ05053.1 AMQ05122.1 AMQ05122.1 AMQ05305.1 AMQ05305.1 hutI hutI AMQ08452.1 AMQ08452.1 pyrC pyrC def def
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMQ05546.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AMQ05571.1Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
hisIBifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family. (213 aa)
ribBABifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (397 aa)
AMQ05734.1Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family. (230 aa)
AMQ05773.1Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AMQ05827.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
AMQ08482.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
AMQ08491.1N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AMQ06025.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (507 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (136 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (300 aa)
AMQ08516.1Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (280 aa)
AMQ08518.1Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AMQ06354.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
AMQ06368.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (87 aa)
AMQ06590.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (111 aa)
AMQ06591.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (78 aa)
nadENAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. (274 aa)
AMQ08395.1Beta-lactam antibiotic acylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)
AMQ04790.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)
AMQ04780.1Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (301 aa)
AMQ04775.1N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AMQ04683.1Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
AMQ04649.1Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family. (260 aa)
AMQ04648.1Peptidase C56; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AMQ04634.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
AMQ04611.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (436 aa)
AMQ04606.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
kynBArylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (216 aa)
AMQ04577.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
ureCUrease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
ureBUrease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family. (122 aa)
ureAUrease subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family. (100 aa)
pyrGCTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (531 aa)
AMQ08001.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
hutGFormimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. (338 aa)
AMQ08129.1Amino acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
AMQ08679.1Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
tadAtRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (172 aa)
AMQ07910.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (386 aa)
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (163 aa)
cheBChemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (382 aa)
def-2Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (173 aa)
AMQ07290.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (384 aa)
AMQ08650.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
AMQ07842.1Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (253 aa)
hutI-2Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AMQ07793.1Formimidoylglutamase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (323 aa)
AMQ07788.1Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (330 aa)
AMQ07729.1Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (366 aa)
AMQ07728.1GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AMQ07707.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (369 aa)
AMQ07703.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (385 aa)
AMQ07702.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (351 aa)
AMQ07685.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (385 aa)
AMQ07645.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (675 aa)
pxpALactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (254 aa)
AMQ07606.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (561 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (291 aa)
AMQ06718.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (426 aa)
folEType I GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
AMQ06885.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (229 aa)
AMQ06892.1L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AMQ07018.1Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
AMQ07019.1Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
AMQ07083.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
AMQ07085.1Cytosine deaminase; Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
AMQ08591.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AMQ08592.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
purHPhosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
purQPhosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (228 aa)
AMQ05053.1Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
AMQ05122.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
AMQ05305.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
hutIImidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
AMQ08452.1Oligosaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (425 aa)
defPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (185 aa)
Your Current Organism:
Sporosarcina psychrophila
NCBI taxonomy Id: 1476
Other names: ATCC 23304, BCRC 11738, Bacillus psychrophilus, CCM 2117, CCRC 11738, CCRC:11738, CCUG 28886, CIP 103267, DSM 3, IAM 12468, IFO 15381, JCM 9075, LMG 6929, LMG:6929, NBRC 15381, NRRL B-3397, S. psychrophila
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