STRINGSTRING
CRM22_011129 CRM22_011129 CRM22_010298 CRM22_010298 CRM22_009268 CRM22_009268 CRM22_010032 CRM22_010032 CRM22_009720 CRM22_009720 CRM22_009378 CRM22_009378 CRM22_007412 CRM22_007412 CRM22_007609 CRM22_007609 CRM22_006307 CRM22_006307 CRM22_004997 CRM22_004997 CRM22_004820 CRM22_004820 CRM22_004753 CRM22_004753 CRM22_004584 CRM22_004584 CRM22_004988 CRM22_004988 CRM22_003412 CRM22_003412 CRM22_001291 CRM22_001291 CRM22_002159 CRM22_002159 CRM22_001135 CRM22_001135 CRM22_000157 CRM22_000157 CRM22_000723 CRM22_000723 CRM22_009815 CRM22_009815 CRM22_000935 CRM22_000935 CRM22_000249 CRM22_000249
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRM22_011129Uncharacterized protein. (325 aa)
CRM22_010298Suf domain-containing protein. (630 aa)
CRM22_009268WD_REPEATS_REGION domain-containing protein. (857 aa)
CRM22_010032WD_REPEATS_REGION domain-containing protein. (320 aa)
CRM22_009720Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (682 aa)
CRM22_009378CID domain-containing protein. (962 aa)
CRM22_007412RRM domain-containing protein. (557 aa)
CRM22_007609Uncharacterized protein. (703 aa)
CRM22_006307RRM domain-containing protein. (438 aa)
CRM22_004997Uncharacterized protein. (1874 aa)
CRM22_004820Cleavage and polyadenylation specificity factor subunit 2. (930 aa)
CRM22_004753Uncharacterized protein. (671 aa)
CRM22_004584Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (326 aa)
CRM22_004988Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (234 aa)
CRM22_003412Uncharacterized protein. (1753 aa)
CRM22_001291WD_REPEATS_REGION domain-containing protein. (425 aa)
CRM22_002159Uncharacterized protein. (149 aa)
CRM22_001135Uncharacterized protein. (978 aa)
CRM22_000157Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (443 aa)
CRM22_000723Uncharacterized protein. (906 aa)
CRM22_009815Uncharacterized protein. (514 aa)
CRM22_000935Fip1 domain-containing protein. (578 aa)
CRM22_000249CPSF_A domain-containing protein. (1803 aa)
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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