STRINGSTRING
CRM22_007775 CRM22_007775 CRM22_007786 CRM22_007786 CRM22_007776 CRM22_007776 CRM22_007787 CRM22_007787 CRM22_007624 CRM22_007624 CRM22_007539 CRM22_007539 CRM22_007868 CRM22_007868 CRM22_009119 CRM22_009119 CRM22_008018 CRM22_008018 CRM22_009706 CRM22_009706 CRM22_006784 CRM22_006784 CRM22_005583 CRM22_005583 CRM22_006437 CRM22_006437 CRM22_006220 CRM22_006220 CRM22_006245 CRM22_006245 CRM22_006614 CRM22_006614 CRM22_006762 CRM22_006762 CRM22_008876 CRM22_008876 CRM22_008540 CRM22_008540 CRM22_004087 CRM22_004087 CRM22_001595 CRM22_001595 CRM22_000354 CRM22_000354 CRM22_001396 CRM22_001396 CRM22_001899 CRM22_001899 CRM22_000673 CRM22_000673 CRM22_000783 CRM22_000783 CRM22_000892 CRM22_000892 CRM22_002029 CRM22_002029 CRM22_001094 CRM22_001094 CRM22_001239 CRM22_001239 CRM22_001213 CRM22_001213 CRM22_002494 CRM22_002494 CRM22_001576 CRM22_001576 CRM22_001491 CRM22_001491 CRM22_000936 CRM22_000936 CRM22_000771 CRM22_000771 CRM22_000358 CRM22_000358 CRM22_000123 CRM22_000123 CRM22_000376 CRM22_000376 CRM22_011087 CRM22_011087 CRM22_008869 CRM22_008869 CRM22_008076 CRM22_008076 CRM22_007229 CRM22_007229 CRM22_000585 CRM22_000585 CRM22_001891 CRM22_001891 CRM22_002127 CRM22_002127 CRM22_003424 CRM22_003424 CRM22_002148 CRM22_002148 CRM22_002309 CRM22_002309 CRM22_003447 CRM22_003447 CRM22_002432 CRM22_002432 CRM22_003545 CRM22_003545 CRM22_002636 CRM22_002636 CRM22_002762 CRM22_002762 CRM22_002932 CRM22_002932 CRM22_000186 CRM22_000186 CRM22_001842 CRM22_001842 CRM22_005121 CRM22_005121 CRM22_006406 CRM22_006406 CRM22_004916 CRM22_004916 CRM22_011380 CRM22_011380 CRM22_011356 CRM22_011356 CRM22_011327 CRM22_011327 CRM22_011111 CRM22_011111 CRM22_010860 CRM22_010860 CRM22_005055 CRM22_005055 CRM22_006286 CRM22_006286 CRM22_007105 CRM22_007105 CRM22_008742 CRM22_008742 CRM22_007412 CRM22_007412 CRM22_006993 CRM22_006993 CRM22_006858 CRM22_006858 CRM22_008552 CRM22_008552 CRM22_006795 CRM22_006795 CRM22_004486 CRM22_004486 CRM22_004488 CRM22_004488 CRM22_004307 CRM22_004307 CRM22_004097 CRM22_004097 CRM22_005211 CRM22_005211 CRM22_004241 CRM22_004241 CRM22_005361 CRM22_005361 CRM22_010601 CRM22_010601 CRM22_010541 CRM22_010541 CRM22_009710 CRM22_009710 CRM22_003850 CRM22_003850 CRM22_004988 CRM22_004988 CRM22_003600 CRM22_003600 CRM22_003349 CRM22_003349 CRM22_003135 CRM22_003135 CRM22_004351 CRM22_004351 CRM22_004148 CRM22_004148 CRM22_004137 CRM22_004137 CRM22_003170 CRM22_003170 CRM22_010854 CRM22_010854 CRM22_010623 CRM22_010623 LSM4 LSM4 CRM22_010607 CRM22_010607 CRM22_008778 CRM22_008778 CRM22_008914 CRM22_008914 CRM22_008992 CRM22_008992 CRM22_009294 CRM22_009294 CRM22_009344 CRM22_009344 CRM22_011404 CRM22_011404 CRM22_005291 CRM22_005291 EIF6 EIF6 CRM22_005149 CRM22_005149
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRM22_007775NUC194 domain-containing protein. (3641 aa)
CRM22_007786Uncharacterized protein. (168 aa)
CRM22_007776Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1026 aa)
CRM22_007787Uncharacterized protein. (167 aa)
CRM22_007624Protein kinase domain-containing protein. (1303 aa)
CRM22_007539CS domain-containing protein. (444 aa)
CRM22_007868Ribosomal_L18_c domain-containing protein. (299 aa)
CRM22_009119Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (443 aa)
CRM22_008018Uncharacterized protein. (508 aa)
CRM22_009706RPOL4c domain-containing protein. (140 aa)
CRM22_006784Brix domain-containing protein. (313 aa)
CRM22_005583Uncharacterized protein. (772 aa)
CRM22_006437HIT-type domain-containing protein. (136 aa)
CRM22_006220Uncharacterized protein. (720 aa)
CRM22_006245Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1035 aa)
CRM22_00661440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (280 aa)
CRM22_006762Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (232 aa)
CRM22_008876Uncharacterized protein. (68 aa)
CRM22_008540Uncharacterized protein. (190 aa)
CRM22_004087Sm domain-containing protein. (197 aa)
CRM22_001595BTB domain-containing protein. (380 aa)
CRM22_000354Uncharacterized protein. (942 aa)
CRM22_001396Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (197 aa)
CRM22_001899Uncharacterized protein. (84 aa)
CRM22_000673EF-hand domain-containing protein. (1500 aa)
CRM22_000783YTH domain-containing protein. (896 aa)
CRM22_000892Ribosomal_L16 domain-containing protein. (221 aa)
CRM22_002029Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (299 aa)
CRM22_001094MPN domain-containing protein; Belongs to the eIF-3 subunit F family. (274 aa)
CRM22_001239SF3b1 domain-containing protein. (1253 aa)
CRM22_001213Ribosomal_L16 domain-containing protein. (164 aa)
CRM22_002494W2 domain-containing protein. (442 aa)
CRM22_001576Uncharacterized protein. (246 aa)
CRM22_001491Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (550 aa)
CRM22_000936RRM domain-containing protein. (212 aa)
CRM22_000771Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (885 aa)
CRM22_000358Uncharacterized protein. (329 aa)
CRM22_000123Uncharacterized protein. (945 aa)
CRM22_000376PIH1_CS domain-containing protein. (390 aa)
CRM22_011087PUA domain-containing protein. (182 aa)
CRM22_008869Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (124 aa)
CRM22_008076Small nuclear ribonucleoprotein G. (76 aa)
CRM22_007229Suf domain-containing protein. (1013 aa)
CRM22_000585Nop domain-containing protein. (529 aa)
CRM22_001891WD_REPEATS_REGION domain-containing protein. (355 aa)
CRM22_002127Uncharacterized protein. (379 aa)
CRM22_003424Uncharacterized protein. (2211 aa)
CRM22_002148Uncharacterized protein. (384 aa)
CRM22_002309Uncharacterized protein. (694 aa)
CRM22_003447Uncharacterized protein. (549 aa)
CRM22_002432Brix domain-containing protein. (370 aa)
CRM22_003545PIH1 domain-containing protein. (324 aa)
CRM22_002636MPN domain-containing protein. (2307 aa)
CRM22_002762Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (674 aa)
CRM22_002932FtsJ domain-containing protein. (431 aa)
CRM22_000186Uncharacterized protein. (163 aa)
CRM22_001842RuvB-like helicase; Belongs to the RuvB family. (471 aa)
CRM22_005121SFM domain-containing protein. (391 aa)
CRM22_006406Sm domain-containing protein. (83 aa)
CRM22_004916Ku domain-containing protein. (796 aa)
CRM22_011380Uncharacterized protein. (529 aa)
CRM22_011356Uncharacterized protein. (845 aa)
CRM22_011327Small nuclear ribonucleoprotein Sm D2. (163 aa)
CRM22_011111Uncharacterized protein. (336 aa)
CRM22_010860Uncharacterized protein. (937 aa)
CRM22_005055WD_REPEATS_REGION domain-containing protein. (1007 aa)
CRM22_006286RuvB-like helicase; Belongs to the RuvB family. (456 aa)
CRM22_007105Uncharacterized protein. (639 aa)
CRM22_008742Uncharacterized protein. (139 aa)
CRM22_007412RRM domain-containing protein. (557 aa)
CRM22_006993RRM domain-containing protein. (272 aa)
CRM22_006858Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (283 aa)
CRM22_008552Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (144 aa)
CRM22_006795Tr-type G domain-containing protein. (465 aa)
CRM22_004486Uncharacterized protein. (588 aa)
CRM22_00448860S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (322 aa)
CRM22_004307Uncharacterized protein. (224 aa)
CRM22_004097Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (89 aa)
CRM22_005211WD_REPEATS_REGION domain-containing protein. (355 aa)
CRM22_004241U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (142 aa)
CRM22_005361Uncharacterized protein. (522 aa)
CRM22_010601Ribosomal_L23eN domain-containing protein. (200 aa)
CRM22_010541Suf domain-containing protein. (856 aa)
CRM22_009710Uncharacterized protein. (512 aa)
CRM22_003850Ribosomal_S7 domain-containing protein. (222 aa)
CRM22_004988Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (234 aa)
CRM22_003600Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (232 aa)
CRM22_003349Uncharacterized protein. (568 aa)
CRM22_003135G domain-containing protein. (608 aa)
CRM22_004351SUI1 domain-containing protein. (178 aa)
CRM22_004148Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (648 aa)
CRM22_004137Uncharacterized protein. (674 aa)
CRM22_003170MPN domain-containing protein. (348 aa)
CRM22_010854WD_REPEATS_REGION domain-containing protein. (1371 aa)
CRM22_010623Matrin-type domain-containing protein. (353 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (145 aa)
CRM22_010607Uncharacterized protein. (558 aa)
CRM22_008778Small nuclear ribonucleoprotein Sm D3. (134 aa)
CRM22_008914Uncharacterized protein. (509 aa)
CRM22_008992Uncharacterized protein. (704 aa)
CRM22_009294Uncharacterized protein. (339 aa)
CRM22_009344WD_REPEATS_REGION domain-containing protein. (624 aa)
CRM22_011404RL10P_insert domain-containing protein. (139 aa)
CRM22_005291RRM domain-containing protein. (244 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (266 aa)
CRM22_005149Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (384 aa)
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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