37 items (Opisthorchis felineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CRM22_011297	Uncharacterized protein. (2268 aa)
	CRM22_011129	Uncharacterized protein. (325 aa)
	CRM22_009969	RRM Nup35-type domain-containing protein. (420 aa)
	CRM22_010114	Nucleoporin_N domain-containing protein. (1623 aa)
	CRM22_009557	WD_REPEATS_REGION domain-containing protein. (364 aa)
	CRM22_009715	RanBD1 domain-containing protein. (428 aa)
	CRM22_009353	Uncharacterized protein. (2445 aa)
	CRM22_009617	Uncharacterized protein. (1889 aa)
	CRM22_009268	WD_REPEATS_REGION domain-containing protein. (857 aa)
	CRM22_008486	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (791 aa)
	CRM22_007867	TPR_MLP1_2 domain-containing protein. (2564 aa)
	CRM22_007293	Nuclear pore protein. (959 aa)
	CRM22_007609	Uncharacterized protein. (703 aa)
	CRM22_005540	Uncharacterized protein. (2356 aa)
	CRM22_006534	Nuclear cap-binding protein subunit 2. (159 aa)
	CRM22_004997	Uncharacterized protein. (1874 aa)
	CRM22_004820	Cleavage and polyadenylation specificity factor subunit 2. (930 aa)
	CRM22_005790	Peptidase S59 domain-containing protein. (2299 aa)
	CRM22_004780	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (208 aa)
	CRM22_004999	Uncharacterized protein. (1547 aa)
	CRM22_003010	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (341 aa)
	CRM22_002879	MIF4G domain-containing protein. (984 aa)
	CRM22_002334	Nup54 domain-containing protein. (598 aa)
	CRM22_001921	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (201 aa)
	CRM22_002760	Uncharacterized protein. (337 aa)
	CRM22_002488	RRM domain-containing protein. (210 aa)
	CRM22_002422	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (201 aa)
	CRM22_000781	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (472 aa)
	CRM22_000586	Uncharacterized protein. (2576 aa)
	CRM22_000404	Uncharacterized protein. (833 aa)
	CRM22_007400	SLBP_RNA_bind domain-containing protein. (502 aa)
	CRM22_004338	Uncharacterized protein. (406 aa)
	CRM22_004025	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (354 aa)
	CRM22_003591	Uncharacterized protein. (1005 aa)
	CRM22_000935	Fip1 domain-containing protein. (578 aa)
	CRM22_000249	CPSF_A domain-containing protein. (1803 aa)
	CRM22_010158	Uncharacterized protein. (352 aa)

Your Current Organism:

Opisthorchis felineus

NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRM22_000249	CRM22_000586	A0A4V3SHB5	A0A4S2MEP8	CPSF_A domain-containing protein.	Uncharacterized protein.	0.663
CRM22_000249	CRM22_000935	A0A4V3SHB5	A0A4V3SH12	CPSF_A domain-containing protein.	Fip1 domain-containing protein.	0.999
CRM22_000249	CRM22_002488	A0A4V3SHB5	A0A4S2MBZ3	CPSF_A domain-containing protein.	RRM domain-containing protein.	0.840
CRM22_000249	CRM22_002760	A0A4V3SHB5	A0A4S2MAI6	CPSF_A domain-containing protein.	Uncharacterized protein.	0.567
CRM22_000249	CRM22_002879	A0A4V3SHB5	A0A4S2M4F7	CPSF_A domain-containing protein.	MIF4G domain-containing protein.	0.843
CRM22_000249	CRM22_003010	A0A4V3SHB5	A0A4S2M3B8	CPSF_A domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.593
CRM22_000249	CRM22_004338	A0A4V3SHB5	A0A4V3SFF7	CPSF_A domain-containing protein.	Uncharacterized protein.	0.561
CRM22_000249	CRM22_004780	A0A4V3SHB5	A0A4S2LVK5	CPSF_A domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.593
CRM22_000249	CRM22_004820	A0A4V3SHB5	A0A4S2LU96	CPSF_A domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
CRM22_000249	CRM22_004997	A0A4V3SHB5	A0A4S2LTA5	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
CRM22_000249	CRM22_004999	A0A4V3SHB5	A0A4S2M066	CPSF_A domain-containing protein.	Uncharacterized protein.	0.682
CRM22_000249	CRM22_005540	A0A4V3SHB5	A0A4S2LQQ5	CPSF_A domain-containing protein.	Uncharacterized protein.	0.730
CRM22_000249	CRM22_005790	A0A4V3SHB5	A0A4S2LVI8	CPSF_A domain-containing protein.	Peptidase S59 domain-containing protein.	0.618
CRM22_000249	CRM22_006534	A0A4V3SHB5	A0A4S2LSR7	CPSF_A domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.752
CRM22_000249	CRM22_007293	A0A4V3SHB5	A0A4S2LGS2	CPSF_A domain-containing protein.	Nuclear pore protein.	0.678
CRM22_000249	CRM22_007609	A0A4V3SHB5	A0A4S2LLZ4	CPSF_A domain-containing protein.	Uncharacterized protein.	0.999
CRM22_000249	CRM22_007867	A0A4V3SHB5	A0A4S2LDU0	CPSF_A domain-containing protein.	TPR_MLP1_2 domain-containing protein.	0.592
CRM22_000249	CRM22_009268	A0A4V3SHB5	A0A4S2L9L2	CPSF_A domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
CRM22_000249	CRM22_009353	A0A4V3SHB5	A0A4S2L7Y9	CPSF_A domain-containing protein.	Uncharacterized protein.	0.587
CRM22_000249	CRM22_009617	A0A4V3SHB5	A0A4S2L8A9	CPSF_A domain-containing protein.	Uncharacterized protein.	0.570