STRINGSTRING
APW41148.1 APW41148.1 cobD cobD APW42682.1 APW42682.1 APW42683.1 APW42683.1 APW42684.1 APW42684.1 APW44778.1 APW44778.1 APW42685.1 APW42685.1 APW42686.1 APW42686.1 APW42687.1 APW42687.1 APW42688.1 APW42688.1 APW42689.1 APW42689.1 APW42690.1 APW42690.1 APW42691.1 APW42691.1 APW42692.1 APW42692.1 APW44779.1 APW44779.1 APW42693.1 APW42693.1 APW42694.1 APW42694.1 APW42695.1 APW42695.1 cobD-2 cobD-2 cobQ cobQ cobT cobT cobS cobS APW42699.1 APW42699.1 APW42990.1 APW42990.1 cobH cobH APW42992.1 APW42992.1 APW42993.1 APW42993.1 APW44815.1 APW44815.1 APW42994.1 APW42994.1 APW42995.1 APW42995.1 APW42996.1 APW42996.1 APW42997.1 APW42997.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW41148.1ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa)
cobDCobalamin biosynthesis protein CbiB; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (306 aa)
APW42682.1Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
APW42683.1Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
APW42684.1Adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (194 aa)
APW44778.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
APW42685.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (359 aa)
APW42686.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
APW42687.1Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
APW42688.1cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (189 aa)
APW42689.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
APW42690.1Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
APW42691.1Cobaltochelatase subunit CobN; Derived by automated computational analysis using gene prediction method: Protein Homology. (1315 aa)
APW42692.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
APW44779.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
APW42693.1Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
APW42694.1Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)
APW42695.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
cobD-2Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (324 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (524 aa)
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (361 aa)
cobSadenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (268 aa)
APW42699.1Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
APW42990.1precorrin-3B synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
cobHCatalyzes the interconversion of precorrin-8X and hydrogenobyrinate; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
APW42992.1Precorrin-2 C(20)-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. (243 aa)
APW42993.1precorrin-3B C(17)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
APW44815.1precorrin-6A reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
APW42994.1Cobalamin biosynthesis bifunctional protein CbiET; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
APW42995.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
APW42996.1Precorrin-4 C(11)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family. (262 aa)
APW42997.1precorrin-6A synthase (deacetylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
Your Current Organism:
Rhodoferax saidenbachensis
NCBI taxonomy Id: 1484693
Other names: CCUG 57711, DSM 22694, R. saidenbachensis, Rhodoferax saidenbachensis Kaden et al. 2014, strain ED16
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