STRINGSTRING
APW41129.1 APW41129.1 APW41096.1 APW41096.1 APW41170.1 APW41170.1 APW41171.1 APW41171.1 APW44623.1 APW44623.1 APW41190.1 APW41190.1 APW41212.1 APW41212.1 APW41214.1 APW41214.1 APW41216.1 APW41216.1 APW44629.1 APW44629.1 APW41241.1 APW41241.1 APW41242.1 APW41242.1 APW44632.1 APW44632.1 APW41259.1 APW41259.1 APW41268.1 APW41268.1 APW41430.1 APW41430.1 APW41449.1 APW41449.1 APW41475.1 APW41475.1 APW41478.1 APW41478.1 APW41496.1 APW41496.1 APW41501.1 APW41501.1 APW41560.1 APW41560.1 ruvB ruvB APW41745.1 APW41745.1 APW41746.1 APW41746.1 APW44670.1 APW44670.1 APW41767.1 APW41767.1 APW41789.1 APW41789.1 APW41798.1 APW41798.1 APW44676.1 APW44676.1 hrcA hrcA APW41896.1 APW41896.1 APW41913.1 APW41913.1 APW41928.1 APW41928.1 APW41941.1 APW41941.1 APW41948.1 APW41948.1 APW41952.1 APW41952.1 APW41954.1 APW41954.1 APW41974.1 APW41974.1 APW41992.1 APW41992.1 APW42035.1 APW42035.1 APW44708.1 APW44708.1 APW42066.1 APW42066.1 APW42080.1 APW42080.1 APW42086.1 APW42086.1 APW42094.1 APW42094.1 APW42190.1 APW42190.1 APW44728.1 APW44728.1 APW42302.1 APW42302.1 APW44739.1 APW44739.1 APW42418.1 APW42418.1 APW42421.1 APW42421.1 APW42425.1 APW42425.1 APW42444.1 APW42444.1 APW44753.1 APW44753.1 APW42466.1 APW42466.1 APW42470.1 APW42470.1 APW42508.1 APW42508.1 lexA lexA APW42617.1 APW42617.1 APW42622.1 APW42622.1 APW42641.1 APW42641.1 APW42713.1 APW42713.1 APW42741.1 APW42741.1 APW42840.1 APW42840.1 APW42877.1 APW42877.1 APW42916.1 APW42916.1 APW44810.1 APW44810.1 APW43005.1 APW43005.1 APW43016.1 APW43016.1 RS694_11380 RS694_11380 APW43089.1 APW43089.1 APW43114.1 APW43114.1 APW43151.1 APW43151.1 APW43165.1 APW43165.1 APW43168.1 APW43168.1 APW44842.1 APW44842.1 APW43254.1 APW43254.1 APW43277.1 APW43277.1 APW43287.1 APW43287.1 APW43293.1 APW43293.1 APW43301.1 APW43301.1 APW43311.1 APW43311.1 APW43324.1 APW43324.1 APW43337.1 APW43337.1 APW43387.1 APW43387.1 APW43390.1 APW43390.1 APW43403.1 APW43403.1 APW43415.1 APW43415.1 APW43423.1 APW43423.1 APW44868.1 APW44868.1 APW43441.1 APW43441.1 APW43503.1 APW43503.1 APW43547.1 APW43547.1 APW43577.1 APW43577.1 APW43618.1 APW43618.1 APW43619.1 APW43619.1 APW43627.1 APW43627.1 APW43686.1 APW43686.1 APW43691.1 APW43691.1 APW44903.1 APW44903.1 APW43734.1 APW43734.1 APW43748.1 APW43748.1 APW43770.1 APW43770.1 APW43774.1 APW43774.1 APW43782.1 APW43782.1 APW43816.1 APW43816.1 APW43821.1 APW43821.1 APW43823.1 APW43823.1 APW43826.1 APW43826.1 APW43966.1 APW43966.1 APW43982.1 APW43982.1 APW44127.1 APW44127.1 APW44216.1 APW44216.1 APW44229.1 APW44229.1 APW44965.1 APW44965.1 APW44306.1 APW44306.1 APW44311.1 APW44311.1 APW44351.1 APW44351.1 APW44366.1 APW44366.1 fur fur APW45003.1 APW45003.1 APW44494.1 APW44494.1 APW44525.1 APW44525.1 APW44531.1 APW44531.1 APW44536.1 APW44536.1 APW44540.1 APW44540.1 APW44544.1 APW44544.1 APW44553.1 APW44553.1 APW44569.1 APW44569.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APW41129.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
APW41096.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
APW41170.1Transcriptional activator NhaR; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (297 aa)
APW41171.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
APW44623.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
APW41190.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (313 aa)
APW41212.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (314 aa)
APW41214.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
APW41216.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (309 aa)
APW44629.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (308 aa)
APW41241.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (313 aa)
APW41242.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
APW44632.1Transcriptional regulator ArgP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (322 aa)
APW41259.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (318 aa)
APW41268.1ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
APW41430.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
APW41449.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (295 aa)
APW41475.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (319 aa)
APW41478.1DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
APW41496.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (304 aa)
APW41501.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
APW41560.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
ruvBHolliday junction branch migration DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (353 aa)
APW41745.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
APW41746.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
APW44670.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
APW41767.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (295 aa)
APW41789.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
APW41798.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (311 aa)
APW44676.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (295 aa)
hrcAHeat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (334 aa)
APW41896.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (302 aa)
APW41913.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
APW41928.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
APW41941.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (310 aa)
APW41948.12-aminoadipate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
APW41952.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
APW41954.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
APW41974.1PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
APW41992.1Cell filamentation protein Fic; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
APW42035.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (303 aa)
APW44708.1Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
APW42066.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
APW42080.1DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
APW42086.1Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APW42094.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
APW42190.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (311 aa)
APW44728.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
APW42302.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
APW44739.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
APW42418.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
APW42421.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GbsR family. (196 aa)
APW42425.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
APW42444.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
APW44753.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
APW42466.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (302 aa)
APW42470.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (298 aa)
APW42508.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
lexARepressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (222 aa)
APW42617.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (299 aa)
APW42622.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
APW42641.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
APW42713.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (297 aa)
APW42741.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
APW42840.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (321 aa)
APW42877.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
APW42916.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
APW44810.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
APW43005.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (287 aa)
APW43016.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (313 aa)
RS694_1138023S rRNA pseudouridylate synthase B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (226 aa)
APW43089.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (310 aa)
APW43114.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
APW43151.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
APW43165.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
APW43168.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
APW44842.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
APW43254.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (314 aa)
APW43277.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
APW43287.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
APW43293.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
APW43301.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (308 aa)
APW43311.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
APW43324.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (303 aa)
APW43337.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
APW43387.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
APW43390.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
APW43403.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
APW43415.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (308 aa)
APW43423.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
APW44868.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
APW43441.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (306 aa)
APW43503.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (323 aa)
APW43547.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
APW43577.1ModE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
APW43618.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
APW43619.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (299 aa)
APW43627.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
APW43686.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
APW43691.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (311 aa)
APW44903.1DNA translocase FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)
APW43734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
APW43748.1DUF480 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family. (233 aa)
APW43770.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (300 aa)
APW43774.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
APW43782.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (339 aa)
APW43816.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
APW43821.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
APW43823.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (315 aa)
APW43826.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (310 aa)
APW43966.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (310 aa)
APW43982.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
APW44127.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (315 aa)
APW44216.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
APW44229.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (290 aa)
APW44965.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
APW44306.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (323 aa)
APW44311.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (305 aa)
APW44351.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
APW44366.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
furTranscriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (142 aa)
APW45003.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
APW44494.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
APW44525.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
APW44531.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
APW44536.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
APW44540.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (297 aa)
APW44544.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
APW44553.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (294 aa)
APW44569.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
Your Current Organism:
Rhodoferax saidenbachensis
NCBI taxonomy Id: 1484693
Other names: CCUG 57711, DSM 22694, R. saidenbachensis, Rhodoferax saidenbachensis Kaden et al. 2014, strain ED16
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