(74 nodes) Mixed, incl. ATP-binding cassette (ABC) transporter complex, and ABC-type amino acid transporter activity network (Martelella endophytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJY44911.1	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AJY44912.1	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	AJY44913.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	AJY47885.1	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	AJY47886.1	Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	AJY44914.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	AJY44960.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AJY44961.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AJY44962.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (262 aa)
	AJY45082.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	AJY47920.1	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AJY45083.1	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (310 aa)
	AJY45084.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
	AJY45085.1	Cobalamin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	AJY45086.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	AJY45087.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
	AJY45088.1	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AJY45089.1	Copper chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
	AJY45090.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	AJY47921.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	glnQ	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AJY47922.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	AJY45092.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	AJY45093.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	AJY45221.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	AJY47947.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	AJY45222.1	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	AJY45223.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	AJY45233.1	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AJY45234.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	AJY45235.1	Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	AJY45681.1	Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
	AJY45785.1	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
	AJY45786.1	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AJY45853.1	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
	AJY45877.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	AJY45878.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	AJY48099.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
	AJY45917.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	AJY48171.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	AJY46285.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	AJY46286.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	AJY46291.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	AJY48172.1	Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	AJY48197.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	AJY46403.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	AJY46404.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	AJY46405.1	Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	AJY48202.1	Zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	znuC	Zinc ABC transporter ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (275 aa)
	AJY48203.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	fur	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (134 aa)
	AJY46662.1	CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
	mntH	Manganese transport protein MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (435 aa)
	AJY46688.1	Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
	AJY48247.1	Transcription initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
	AJY47012.1	Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	AJY47013.1	Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AJY47014.1	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AJY48298.1	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AJY47074.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	AJY48324.1	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	AJY47508.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AJY48398.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	AJY47509.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	fur-2	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (137 aa)
	AJY47539.1	Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	AJY47540.1	Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AJY47541.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AJY47542.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AJY47772.1	Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (306 aa)
	AJY47773.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	AJY47774.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	fur-3	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (133 aa)

Your Current Organism:

Martelella endophytica

NCBI taxonomy Id: 1486262
Other names: KCCM 43011, M. endophytica, Martelella endophytica Bibi et al. 2013, NBRC 109149, strain YC6887

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJY44911.1	AJY44912.1	TM49_03150	TM49_03155	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJY44911.1	AJY44913.1	TM49_03150	TM49_03160	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJY44911.1	AJY44914.1	TM49_03150	TM49_03175	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJY44911.1	AJY45221.1	TM49_03150	TM49_05185	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJY44911.1	AJY45222.1	TM49_03150	TM49_05195	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AJY44911.1	AJY45223.1	TM49_03150	TM49_05200	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
AJY44911.1	AJY47885.1	TM49_03150	TM49_03165	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
AJY44911.1	AJY47886.1	TM49_03150	TM49_03170	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJY44911.1	AJY47947.1	TM49_03150	TM49_05190	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJY44912.1	AJY44911.1	TM49_03155	TM49_03150	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJY44912.1	AJY44913.1	TM49_03155	TM49_03160	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
AJY44912.1	AJY44914.1	TM49_03155	TM49_03175	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJY44912.1	AJY45221.1	TM49_03155	TM49_05185	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJY44912.1	AJY45222.1	TM49_03155	TM49_05195	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJY44912.1	AJY45223.1	TM49_03155	TM49_05200	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521
AJY44912.1	AJY45235.1	TM49_03155	TM49_05270	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
AJY44912.1	AJY47012.1	TM49_03155	TM49_17125	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJY44912.1	AJY47885.1	TM49_03155	TM49_03165	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
AJY44912.1	AJY47886.1	TM49_03155	TM49_03170	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AJY44912.1	AJY47947.1	TM49_03155	TM49_05190	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488