(55 nodes) Mixed, incl. Polyamine binding, and ABC-type polyamine transporter activity network (Martelella endophytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJY44585.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
	AJY44821.1	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (341 aa)
	AJY44822.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	AJY44823.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	AJY44824.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	AJY44825.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	AJY47903.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
	AJY44982.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	AJY44983.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	AJY44984.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	potA	ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (371 aa)
	AJY44986.1	NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	AJY47904.1	Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
	AJY44987.1	Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
	AJY44988.1	Major pilin protein fimA; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	AJY44989.1	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (314 aa)
	AJY47909.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	AJY45019.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	AJY45020.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	potA-2	Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (364 aa)
	AJY45052.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	AJY45354.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	AJY45355.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AJY45356.1	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AJY45357.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AJY47973.1	Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	AJY45620.1	Phosphoribosyltransferase; Involved in nucleotide synthesis and salvage; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	potA-3	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (356 aa)
	AJY45636.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AJY45637.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AJY45638.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	AJY45882.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	AJY45883.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	potA-4	ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (362 aa)
	AJY45885.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AJY45886.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
	AJY45887.1	Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
	AJY46574.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	AJY46576.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AJY46577.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	AJY46578.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	AJY48224.1	Spermidine/putrescine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (361 aa)
	potA-5	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (364 aa)
	AJY46824.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	AJY46825.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
	AJY46826.1	Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	AJY47735.1	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	AJY47736.1	Spermidine/putrescine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (364 aa)
	AJY47737.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	AJY47738.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	AJY47794.1	Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
	AJY48448.1	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AJY47795.1	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	AJY47796.1	Spermidine/putrescine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (358 aa)
	AJY47797.1	N-carbamoyl-D-amino acid hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)

Your Current Organism:

Martelella endophytica

NCBI taxonomy Id: 1486262
Other names: KCCM 43011, M. endophytica, Martelella endophytica Bibi et al. 2013, NBRC 109149, strain YC6887

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJY44585.1	AJY45354.1	TM49_01070	TM49_06040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
AJY44585.1	AJY45356.1	TM49_01070	TM49_06050	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.514
AJY44585.1	AJY45620.1	TM49_01070	TM49_07940	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoribosyltransferase; Involved in nucleotide synthesis and salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
AJY44821.1	AJY44822.1	TM49_02565	TM49_02570	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
AJY44821.1	AJY44823.1	TM49_02565	TM49_02575	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AJY44821.1	AJY44983.1	TM49_02565	TM49_03645	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
AJY44821.1	AJY44984.1	TM49_02565	TM49_03650	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.525
AJY44821.1	AJY45019.1	TM49_02565	TM49_03865	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
AJY44821.1	AJY45355.1	TM49_02565	TM49_06045	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AJY44821.1	AJY45356.1	TM49_02565	TM49_06050	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AJY44821.1	AJY45636.1	TM49_02565	TM49_08035	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
AJY44821.1	AJY45637.1	TM49_02565	TM49_08040	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
AJY44821.1	AJY45638.1	TM49_02565	TM49_08045	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
AJY44821.1	AJY45885.1	TM49_02565	TM49_09710	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
AJY44821.1	AJY45886.1	TM49_02565	TM49_09715	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AJY44821.1	AJY46825.1	TM49_02565	TM49_15940	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
AJY44821.1	AJY47736.1	TM49_02565	TM49_21950	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.448
AJY44821.1	AJY47737.1	TM49_02565	TM49_21955	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AJY44821.1	AJY47738.1	TM49_02565	TM49_21960	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
AJY44821.1	AJY47795.1	TM49_02565	TM49_22325	Putrescine/spermidine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501