STRINGSTRING
AJY48278.1 AJY48278.1 AJY44692.1 AJY44692.1 AJY45576.1 AJY45576.1 AJY45833.1 AJY45833.1 xerC xerC AJY46186.1 AJY46186.1 xerD xerD AJY46248.1 AJY46248.1 AJY48166.1 AJY48166.1 AJY47296.1 AJY47296.1 AJY46256.1 AJY46256.1 AJY46510.1 AJY46510.1 AJY46988.1 AJY46988.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJY48278.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (393 aa)
AJY44692.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (335 aa)
AJY45576.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
AJY45833.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
xerCRecombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (311 aa)
AJY46186.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
xerDRecombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (316 aa)
AJY46248.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
AJY48166.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (391 aa)
AJY47296.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AJY46256.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
AJY46510.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
AJY46988.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
Your Current Organism:
Martelella endophytica
NCBI taxonomy Id: 1486262
Other names: KCCM 43011, M. endophytica, Martelella endophytica Bibi et al. 2013, NBRC 109149, strain YC6887
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