STRINGSTRING
SHF62338.1 SHF62338.1 SHF63308.1 SHF63308.1 SHF61046.1 SHF61046.1 SHF70019.1 SHF70019.1 SHF70075.1 SHF70075.1 glcB glcB SHE32480.1 SHE32480.1 SHE32630.1 SHE32630.1 SHE36483.1 SHE36483.1 SHE37183.1 SHE37183.1 SHE39784.1 SHE39784.1 SHE41415.1 SHE41415.1 SHE42603.1 SHE42603.1 SHE42699.1 SHE42699.1 SHE43540.1 SHE43540.1 SHE29474.1 SHE29474.1 SHE47041.1 SHE47041.1 SHE48667.1 SHE48667.1 SHE31206.1 SHE31206.1 SHE32369.1 SHE32369.1 SHE63384.1 SHE63384.1 SHE70127.1 SHE70127.1 SHE70330.1 SHE70330.1 SHE60463.1 SHE60463.1 SHE75400.1 SHE75400.1 SHE90349.1 SHE90349.1 SHE91094.1 SHE91094.1 SHE93005.1 SHE93005.1 SHE95001.1 SHE95001.1 SHE95696.1 SHE95696.1 SHE97598.1 SHE97598.1 SHE99514.1 SHE99514.1 SHF05112.1 SHF05112.1 SHF15503.1 SHF15503.1 SHF15955.1 SHF15955.1 SHF16839.1 SHF16839.1 SHF18122.1 SHF18122.1 glyA glyA SHF12520.1 SHF12520.1 SHF19698.1 SHF19698.1 SHF20178.1 SHF20178.1 SHF21154.1 SHF21154.1 SHF21221.1 SHF21221.1 SHF11822.1 SHF11822.1 SHF13246.1 SHF13246.1 gcvH gcvH gcvP gcvP mdh mdh SHF13714.1 SHF13714.1 SHF13815.1 SHF13815.1 SHF14291.1 SHF14291.1 SHF14378.1 SHF14378.1 SHF28937.1 SHF28937.1 SHF31830.1 SHF31830.1 SHF29600.1 SHF29600.1 phnW phnW SHF47646.1 SHF47646.1 SHF47893.1 SHF47893.1 SHF55098.1 SHF55098.1 SHF55511.1 SHF55511.1 SHF55543.1 SHF55543.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHF62338.1Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (941 aa)
SHF63308.1N-formylglutamate deformylase. (286 aa)
SHF61046.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
SHF70019.1Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (989 aa)
SHF70075.1Formate dehydrogenase gamma subunit. (395 aa)
glcBMalate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. (718 aa)
SHE32480.1Serine-glyoxylate aminotransferase apoenzyme. (392 aa)
SHE32630.1Dihydrolipoamide dehydrogenase. (579 aa)
SHE36483.1Glutamine synthetase. (468 aa)
SHE37183.1Hydroxypyruvate reductase. (443 aa)
SHE39784.1Aspartate aminotransferase. (375 aa)
SHE41415.1NAD-dependent formate dehydrogenase flavoprotein subunit. (561 aa)
SHE42603.1Glutamate--putrescine ligase; Belongs to the glutamine synthetase family. (444 aa)
SHE42699.1Glutamine synthetase. (460 aa)
SHE43540.1Arsenate reductase, glutaredoxin family; Belongs to the ArsC family. (102 aa)
SHE29474.1Hypothetical protein. (277 aa)
SHE47041.1Phosphoglycolate phosphatase. (221 aa)
SHE48667.1methylmalonyl-CoA mutase. (710 aa)
SHE31206.12-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. (213 aa)
SHE32369.1Hydroxypyruvate isomerase; Belongs to the hyi family. (255 aa)
SHE63384.1Glutamine synthetase. (454 aa)
SHE70127.1Uncharacterized conserved protein, contains ferritin-like DUF455 domain. (272 aa)
SHE70330.1Dihydrolipoamide dehydrogenase. (465 aa)
SHE60463.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (922 aa)
SHE75400.1Citrate synthase; Belongs to the citrate synthase family. (429 aa)
SHE90349.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
SHE91094.1beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (318 aa)
SHE93005.1Hypothetical protein. (261 aa)
SHE95001.1Phosphoglycolate phosphatase. (227 aa)
SHE95696.1Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. (472 aa)
SHE97598.1Acetyl esterase/lipase. (263 aa)
SHE99514.13-hydroxybutyryl-CoA dehydratase. (152 aa)
SHF05112.1Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase. (403 aa)
SHF15503.1Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (314 aa)
SHF15955.1methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase. (134 aa)
SHF16839.1Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (328 aa)
SHF18122.1Phosphoglycolate phosphatase. (232 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (431 aa)
SHF12520.1Phosphoglycolate phosphatase. (214 aa)
SHF19698.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
SHF20178.1Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (318 aa)
SHF21154.1L(+)-tartrate dehydratase beta subunit. (221 aa)
SHF21221.1L(+)-tartrate dehydratase alpha subunit. (319 aa)
SHF11822.1Aminomethyltransferase. (371 aa)
SHF13246.1Dihydrolipoamide dehydrogenase. (462 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (119 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (948 aa)
mdhMalate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (320 aa)
SHF13714.1(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. (283 aa)
SHF13815.1L-erythro-3-methylmalyl-CoA dehydratase. (343 aa)
SHF14291.1(R)-ethylmalonyl-CoA mutase. (659 aa)
SHF14378.1crotonyl-CoA carboxylase/reductase. (430 aa)
SHF28937.1Glyoxylate/hydroxypyruvate reductase A. (310 aa)
SHF31830.1Phosphoglycolate phosphatase. (170 aa)
SHF29600.12-aminoethylphosphonate-pyruvate transaminase. (453 aa)
phnW2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (395 aa)
SHF47646.1Cysteine-rich secretory protein family protein. (169 aa)
SHF47893.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
SHF55098.1Hypothetical protein. (288 aa)
SHF55511.1Glycolate oxidase FAD binding subunit. (365 aa)
SHF55543.1Glycolate oxidase iron-sulfur subunit. (443 aa)
Your Current Organism:
Litoreibacter ascidiaceicola
NCBI taxonomy Id: 1486859
Other names: CECT 8539, DSM 100566, KCTC 42050, L. ascidiaceicola, Litoreibacter ascidiaceicola Kim et al. 2014, Litoreibacter sp. RSS4-C1, strain RSS4-C1
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