STRINGSTRING
ALP89139.1 ALP89139.1 ALR90744.1 ALR90744.1 ALR90665.1 ALR90665.1 ALR90493.1 ALR90493.1 ALR90347.1 ALR90347.1 ALP91574.1 ALP91574.1 ALP91566.1 ALP91566.1 ALP91285.1 ALP91285.1 ALP90714.1 ALP90714.1 ALP89182.1 ALP89182.1 ALP88832.1 ALP88832.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALP89139.1PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
ALR90744.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
ALR90665.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
ALR90493.1PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC; Involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)
ALR90347.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
ALP91574.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
ALP91566.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
ALP91285.1PTS ascorbate transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
ALP90714.1PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)
ALP89182.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
ALP88832.1PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
Your Current Organism:
Clostridium butyricum
NCBI taxonomy Id: 1492
Other names: ATCC 19398, Amylobacter navicula, Bacillus amylobacter, Bacillus butyricus, Bacillus navicula, Bacterium navicula, C. butyricum, CCUG 4217, CIP 103309, Clostridium kainantoi, Clostridium naviculum, Clostridium pseudotetanicum, DSM 10702, HAMBI 482, IAM 14194, IFO 13949, Metallacter amylobacter, NBRC 13949, NCCB 89156, NCIB 7423, NCIMB 7423, NCTC 7423, VPI 3266
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