STRINGSTRING
GY26_00055 GY26_00055 GY26_00255 GY26_00255 GY26_00595 GY26_00595 psd psd GY26_02120 GY26_02120 GY26_02265 GY26_02265 GY26_02270 GY26_02270 GY26_02420 GY26_02420 GY26_02425 GY26_02425 GY26_03025 GY26_03025 GY26_03415 GY26_03415 clsA clsA GY26_04475 GY26_04475 gpsA gpsA GY26_05025 GY26_05025 GY26_05465 GY26_05465 GY26_05470 GY26_05470 glcE glcE glcF glcF GY26_05485 GY26_05485 GY26_05705 GY26_05705 GY26_06085 GY26_06085 glpD glpD GY26_06335 GY26_06335 GY26_06615 GY26_06615 GY26_06620 GY26_06620 GY26_06900 GY26_06900 GY26_06915 GY26_06915 GY26_07040 GY26_07040 GY26_07045 GY26_07045 GY26_07050 GY26_07050 GY26_07525 GY26_07525 GY26_07530 GY26_07530 GY26_07535 GY26_07535 GY26_07540 GY26_07540 GY26_07545 GY26_07545 GY26_07550 GY26_07550 GY26_07560 GY26_07560 GY26_08390 GY26_08390 GY26_08395 GY26_08395 glpK glpK GY26_08460 GY26_08460 GY26_09880 GY26_09880 GY26_09885 GY26_09885 GY26_09890 GY26_09890 GY26_09895 GY26_09895 cyoE cyoE GY26_10565 GY26_10565 GY26_10570 GY26_10570 GY26_10575 GY26_10575 GY26_11445 GY26_11445 GY26_11760 GY26_11760 GY26_11825 GY26_11825 GY26_11885 GY26_11885 GY26_12505 GY26_12505 GY26_13650 GY26_13650 GY26_13655 GY26_13655 GY26_13820 GY26_13820 plsB plsB GY26_14385 GY26_14385 GY26_14750 GY26_14750 GY26_15635 GY26_15635 GY26_16895 GY26_16895 GY26_17210 GY26_17210 nuoB nuoB nuoC nuoC GY26_17645 GY26_17645 GY26_17650 GY26_17650 GY26_17655 GY26_17655 nuoH nuoH nuoI nuoI GY26_17670 GY26_17670 nuoK nuoK GY26_17680 GY26_17680 GY26_17685 GY26_17685 nuoN nuoN GY26_17850 GY26_17850 GY26_17855 GY26_17855 nuoN-2 nuoN-2 GY26_18205 GY26_18205 GY26_18210 GY26_18210 nuoK-2 nuoK-2 GY26_18220 GY26_18220 GY26_18225 GY26_18225 GY26_18230 GY26_18230 GY26_18240 GY26_18240 GY26_18380 GY26_18380 GY26_18415 GY26_18415 GY26_18530 GY26_18530 GY26_18985 GY26_18985 GY26_19045 GY26_19045 GY26_20140 GY26_20140 GY26_20145 GY26_20145
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GY26_00055Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (713 aa)
GY26_00255Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
GY26_00595Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
psdPhosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (276 aa)
GY26_02120Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
GY26_02265Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
GY26_02270Cytochrome c, class I; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
GY26_02420Copper chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
GY26_02425Electron transporter SenC; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
GY26_03025Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
GY26_03415Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
clsACardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol. (473 aa)
GY26_04475Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
gpsAGlycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (350 aa)
GY26_05025Lipid kinase; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. (306 aa)
GY26_05465Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (565 aa)
GY26_05470Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
glcEGlycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
glcFGlycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
GY26_05485Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
GY26_05705Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
GY26_06085Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
glpDGlycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (518 aa)
GY26_06335Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
GY26_06615Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
GY26_06620Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
GY26_06900NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
GY26_06915Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
GY26_07040LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (299 aa)
GY26_07045NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
GY26_07050Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0753 family. (837 aa)
GY26_07525Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. (934 aa)
GY26_07530NADH-ubiquinone oxidoreductase subunit 4L; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
GY26_07535Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
GY26_07540Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
GY26_07545Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)
GY26_07550Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
GY26_07560Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
GY26_08390Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (504 aa)
GY26_08395Glycerol transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family. (242 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (502 aa)
GY26_08460Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
GY26_09880Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
GY26_09885Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (660 aa)
GY26_09890Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
GY26_09895Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (297 aa)
GY26_10565Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
GY26_10570Recombinase; May be involved in recombination. Belongs to the RdgC family. (308 aa)
GY26_10575Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
GY26_11445Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
GY26_11760Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
GY26_11825Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (125 aa)
GY26_11885Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
GY26_12505PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
GY26_13650Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
GY26_13655Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
GY26_13820Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
plsBGlycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family. (809 aa)
GY26_14385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
GY26_14750Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). (157 aa)
GY26_156352-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
GY26_16895Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
GY26_17210Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
nuoBNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (225 aa)
nuoCNADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (586 aa)
GY26_17645NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
GY26_17650NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (446 aa)
GY26_17655NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (927 aa)
nuoHNADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (327 aa)
nuoINADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (182 aa)
GY26_17670Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (214 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
GY26_17680NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)
GY26_17685NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
nuoNNADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (484 aa)
GY26_17850Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
GY26_17855Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
nuoN-2NADH-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (469 aa)
GY26_18205Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
GY26_18210Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
nuoK-2NADH-ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
GY26_18220NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (206 aa)
GY26_18225NuoH2 NADH chain H; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
GY26_18230Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
GY26_18240NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (115 aa)
GY26_18380Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
GY26_18415Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
GY26_18530Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
GY26_18985CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (182 aa)
GY26_19045FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1099 aa)
GY26_20140Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
GY26_201453-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (420 aa)
Your Current Organism:
Gammaproteobacteria bacterium MFB021
NCBI taxonomy Id: 1492922
Other names: G. bacterium MFB021, bacterium MFB021
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