STRINGSTRING
ppc ppc sucC sucC sucD sucD ART_3789 ART_3789 ART_0026 ART_0026 ART_0028 ART_0028 ART_0214 ART_0214 ART_0251 ART_0251 ART_0343 ART_0343 ART_0647 ART_0647 mqo mqo ART_1540 ART_1540 ART_1897 ART_1897 mdh mdh ART_2018 ART_2018 ART_3157 ART_3157 ART_3158 ART_3158 ART_3866 ART_3866 ART_3897 ART_3897 ART_3899 ART_3899 ART_3900 ART_3900 fumC fumC ART_4022 ART_4022
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (939 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (389 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (300 aa)
ART_3789Aspartate ammonia-lyase; COG1027. (483 aa)
ART_00262-methylcitrate synthase; COG0372; Belongs to the citrate synthase family. (379 aa)
ART_00282-methylcitrate dehydratase; COG2079. (506 aa)
ART_02142-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; COG0508. (591 aa)
ART_0251Aconitase; COG1048. (941 aa)
ART_0343Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; COG0479. (249 aa)
ART_0647Aconitate hydratase; COG1048. (934 aa)
mqoMalate:quinone oxidoreductase; COG0579. (499 aa)
ART_15402-oxoglutarate decarboxylase; COG0567. (1264 aa)
ART_1897Putative citrate synthase; COG0372; Belongs to the citrate synthase family. (427 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (329 aa)
ART_2018Hypothetical protein. (285 aa)
ART_3157Malate synthase A; COG2225; Belongs to the malate synthase family. (549 aa)
ART_3158Isocitrate lyase; COG2224. (440 aa)
ART_3866Isocitrate dehydrogenase; COG2838; Belongs to the monomeric-type IDH family. (739 aa)
ART_3897Succinate dehydrogenase iron-sulfur protein; COG0479; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (263 aa)
ART_3899Succinate dehydrogenase hydrophobic membrane anchor protein; COG2142. (155 aa)
ART_3900Succinate dehydrogenase cytochrome, b-556 subunit; COG2009. (111 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (476 aa)
ART_4022Hydroxyglutarate oxidase; COG0579. (398 aa)
Your Current Organism:
Arthrobacter sp. PAMC25486
NCBI taxonomy Id: 1494608
Other names: A. sp. PAMC 25486, Arthrobacter sp. PAMC 25486
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