STRINGSTRING
ART_0047 ART_0047 ART_0061 ART_0061 ART_0077 ART_0077 ART_0344 ART_0344 ART_0345 ART_0345 ART_0402 ART_0402 ART_0403 ART_0403 ART_0448 ART_0448 ART_0511 ART_0511 ART_0683 ART_0683 ART_0691 ART_0691 pyrD pyrD ART_0888 ART_0888 ART_0905 ART_0905 ART_1227 ART_1227 ART_1264 ART_1264 ART_1284 ART_1284 ART_1397 ART_1397 ART_1665 ART_1665 ART_1751 ART_1751 ART_1762 ART_1762 ART_1769 ART_1769 ART_1808 ART_1808 ART_2292 ART_2292 ART_2491 ART_2491 ART_3165 ART_3165 ART_3221 ART_3221 ART_3458 ART_3458 ART_3483 ART_3483 ART_3524 ART_3524 ART_3553 ART_3553 ART_3843 ART_3843 ART_3898 ART_3898 ART_3899 ART_3899 ART_3900 ART_3900 ART_4197 ART_4197 ART_4206 ART_4206 ART_4230 ART_4230 ART_4262 ART_4262 dapB dapB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ART_0047Putative xylitol oxidase; COG0277. (428 aa)
ART_0061Prephenate dehydrogenase; COG0287. (358 aa)
ART_0077Hypothetical protein; COG1960. (598 aa)
ART_0344Hypothetical protein; COG1053. (648 aa)
ART_0345Succinate dehydrogenase, cytochrome b subunit. (238 aa)
ART_0402Succinate dehydrogenase, flavoprotein subunit; COG1053. (85 aa)
ART_0403Hypothetical protein; COG1053. (154 aa)
ART_0448Succinate dehydrogenase, flavoprotein subunit; COG1053. (579 aa)
ART_0511Alcohol dehydrogenase zinc-binding domain-containing protein; COG2130. (344 aa)
ART_0683acyl-CoA dehydrogenase; COG1960. (383 aa)
ART_0691acyl-CoA oxidase; COG1960. (691 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (355 aa)
ART_0888Hypothetical protein; COG3573. (557 aa)
ART_0905Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (410 aa)
ART_1227acyl-CoA dehydrogenase domain-containing protein; COG1960. (406 aa)
ART_1264UDP-N-acetyl-D-mannosamine dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (433 aa)
ART_1284UDP-N-acetyl-D-mannosamine dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (417 aa)
ART_1397L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (615 aa)
ART_1665Putative UDP-N-acetyl-D-mannosamine dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (429 aa)
ART_1751Hypothetical protein; COG1960. (378 aa)
ART_1762acyl-CoA dehydrogenase; COG1960. (385 aa)
ART_1769acyl-CoA dehydrogenase; COG1960. (390 aa)
ART_1808Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (511 aa)
ART_2292Monooxygenase, FAD-binding protein; COG0644. (440 aa)
ART_2491Hypothetical protein; COG0277. (435 aa)
ART_3165Hypothetical protein; COG1960. (441 aa)
ART_3221acyl-CoA dehydrogenase domain-containing protein; COG1960. (404 aa)
ART_3458Fumarate reductase flavoprotein subunit; COG1053. (471 aa)
ART_3483Putative acyl-CoA dehydrogenase; COG1960. (398 aa)
ART_3524Hypothetical protein. (354 aa)
ART_3553Hypothetical protein; COG3871. (125 aa)
ART_3843Putative acyl-CoA dehydrogenase; COG1960. (558 aa)
ART_3898Succinate dehydrogenase, flavoprotein subunit; COG1053. (599 aa)
ART_3899Succinate dehydrogenase hydrophobic membrane anchor protein; COG2142. (155 aa)
ART_3900Succinate dehydrogenase cytochrome, b-556 subunit; COG2009. (111 aa)
ART_4197Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (393 aa)
ART_4206Putative acyl-CoA dehydrogenase; COG1960. (396 aa)
ART_4230butyryl-CoA dehydrogenase; COG1960. (387 aa)
ART_4262Hypothetical protein; COG1960. (385 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (252 aa)
Your Current Organism:
Arthrobacter sp. PAMC25486
NCBI taxonomy Id: 1494608
Other names: A. sp. PAMC 25486, Arthrobacter sp. PAMC 25486
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