STRINGSTRING
ART_0442 ART_0442 ART_0444 ART_0444 ART_0445 ART_0445 ART_0790 ART_0790 dapD dapD ART_1975 ART_1975 ART_2400 ART_2400 ART_2655 ART_2655 ART_3736 ART_3736 ART_3903 ART_3903 dapB dapB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ART_0442Hypothetical protein; COG1473. (140 aa)
ART_0444Peptidase; COG1473. (95 aa)
ART_0445Hypothetical protein; COG1473. (205 aa)
ART_0790Hypothetical protein. (419 aa)
dapDPutative transferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. (329 aa)
ART_1975Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate. (328 aa)
ART_2400Aspartate kinase; COG0527; Belongs to the aspartokinase family. (428 aa)
ART_2655N-carbamoyl-L-amino acid amidohydrolase; COG0624. (419 aa)
ART_3736M20D family peptidase; COG1473. (396 aa)
ART_3903Metal-dependent amidase/aminoacylase/carboxypeptidase; COG1473. (402 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (252 aa)
Your Current Organism:
Arthrobacter sp. PAMC25486
NCBI taxonomy Id: 1494608
Other names: A. sp. PAMC 25486, Arthrobacter sp. PAMC 25486
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