STRINGSTRING
AJC85820.1 AJC85820.1 fcl fcl fcl-2 fcl-2 AJC85823.1 AJC85823.1 AJC85824.1 AJC85824.1 gmhA-2 gmhA-2 AJC85826.1 AJC85826.1 gmhB gmhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJC85820.1dTDP-4-dehydrorhamnose 3,5-epimerase; Pfam match to PF00908.12 dTDP_sugar_isom. (182 aa)
fclGDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (356 aa)
fcl-2GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (353 aa)
AJC85823.1GDP-mannose 4,6-dehydratase; Pfam match to PF01370.16 Epimerase. (343 aa)
AJC85824.1Capsular biosynthesis sugar kinase; Pfam matches to PF00288.21 GHMP_kinases_N, and to PF08544.8 GHMP_kinases_C. (338 aa)
gmhA-2Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (201 aa)
AJC85826.1Pfam match to PF00483.18 NTP_transferase. (224 aa)
gmhBD,D-heptose 1,7-bisphosphate phosphatase; Pfam match to PF13242.1 Hydrolase_like. (169 aa)
Your Current Organism:
Campylobacter sp. RM16704
NCBI taxonomy Id: 1500960
Other names: C. sp. RM16704
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