STRINGSTRING
EW15_0456 EW15_0456 EW15_0457 EW15_0457 der der EW15_0461 EW15_0461 sepF sepF proC proC EW15_0985 EW15_0985 EW15_1365 EW15_1365 EW15_1558 EW15_1558 EW15_1559 EW15_1559 EW15_1560 EW15_1560 EW15_1561 EW15_1561 EW15_1841 EW15_1841 EW15_2038 EW15_2038
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EW15_0456tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (330 aa)
EW15_0457Hypothetical protein; Alternative locus ID: PMIT0801_0458; FIG00942835: hypothetical protein. (68 aa)
derGTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (456 aa)
EW15_0461Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (214 aa)
sepFHypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (191 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (280 aa)
EW15_0985Cell division protein YlmG/Ycf19; Alternative locus ID: PMIT0801_0988; YggT family. (100 aa)
EW15_1365Proline iminopeptidase; Alternative locus ID: PMIT0801_1368; Belongs to the peptidase S33 family. (316 aa)
EW15_1558Ubiquinone biosynthesis monooxygenase UbiB; Alternative locus ID: PMIT0801_1561. (530 aa)
EW15_1559Putative membrane protein; Alternative locus ID: PMIT0801_1562. (152 aa)
EW15_1560Ribosomal small subunit pseudouridine synthase A; Alternative locus ID: PMIT0801_1563; Belongs to the pseudouridine synthase RsuA family. (237 aa)
EW15_1561Putative helix-turn-helix protein; Alternative locus ID: PMIT0801_1564. (177 aa)
EW15_1841Hypothetical protein; Alternative locus ID: PMIT0801_1844; FIG001583: hypothetical protein; contains S4-like RNA binding domain. (262 aa)
EW15_2038Phage protein; Alternative locus ID: PMIT0801_2041. (179 aa)
Your Current Organism:
Prochlorococcus sp. MIT0801
NCBI taxonomy Id: 1501269
Other names: P. sp. MIT 0801, Prochlorococcus sp. MIT 0801
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.