(12 nodes) Mixed, incl. Glycosylation, and Glycosyl transferase 4-like domain network (Burkholderia stagnalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOK57452.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	AOK55696.1	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (150 aa)
	AOK57453.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
	AOK55697.1	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	AOK55698.1	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	AOK55699.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	AOK55701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
	AOK57454.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
	AOK55702.1	Glycosyl transferase family 28; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
	mntH	Divalent metal cation transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family. (438 aa)
	AOK57455.1	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AOK55706.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)

Your Current Organism:

Burkholderia stagnalis

NCBI taxonomy Id: 1503054
Other names: B. stagnalis, Burkholderia sp. Bp6893, Burkholderia sp. Bp6916, Burkholderia sp. Bp7118, Burkholderia sp. Bp7119, Burkholderia sp. Bp7120, Burkholderia sp. Bp7137, Burkholderia sp. Bp7139, Burkholderia sp. Bp7142, Burkholderia sp. Bp7143, Burkholderia sp. Bp7145, Burkholderia sp. Bp7260, Burkholderia sp. Bp7266, Burkholderia sp. Bp7278, Burkholderia sp. Bp7280, Burkholderia sp. Bp7282, Burkholderia sp. Bp7288, Burkholderia sp. Bp7466, Burkholderia sp. Bp7469, Burkholderia sp. Bp7471, Burkholderia sp. Bp7483, Burkholderia sp. Bp7485, Burkholderia sp. Bp7491, Burkholderia sp. Bp7519, Burkholderia sp. Bp7520, Burkholderia sp. Bp7521, Burkholderia sp. Bp7554, Burkholderia sp. Bp7555, Burkholderia sp. Bp7571, Burkholderia sp. Bp7572, Burkholderia sp. Bp7635, Burkholderia sp. Bp7636, Burkholderia sp. Bp7639, Burkholderia sp. Bp7640, Burkholderia sp. Bp7641, Burkholderia sp. Bp7642, Burkholderia sp. Bp7643, Burkholderia sp. Bp7644, Burkholderia sp. Bp7645, Burkholderia sp. Bp7651, Burkholderia sp. Bp7656, Burkholderia sp. Bp7657, Burkholderia sp. Bp7658, Burkholderia sp. Bp7663, Burkholderia sp. Bp7665, Burkholderia sp. Bp7666, Burkholderia sp. Bp7667, Burkholderia sp. Bp7670, Burkholderia sp. Bp7671, Burkholderia sp. Bp7673, Burkholderia sp. Bp7681, Burkholderia sp. Bp7682, Burkholderia sp. Bp7684, Burkholderia sp. Bp7685, Burkholderia sp. Bp7686, Burkholderia sp. Bp7687, Burkholderia sp. Bp7690, Burkholderia sp. Bp7692, Burkholderia sp. Bp7693, Burkholderia sp. Bp7694, Burkholderia sp. Bp7697, Burkholderia sp. Bp7698, Burkholderia sp. Bp7699, Burkholderia sp. Bp7705, Burkholderia sp. Bp7707, Burkholderia sp. LMG 28156, Burkholderia sp. LMG 28157, Burkholderia sp. R-52095, Burkholderia sp. R-52096, Burkholderia sp. R-52235, Burkholderia sp. R-52237, Burkholderia sp. R-52238, Burkholderia sp. R-52240, Burkholderia stagnalis De Smet et al. 2015, CCUG 65686, LMG 28156, LMG:28156

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOK55696.1	AOK55697.1	WT74_23215	WT74_23225	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
AOK55696.1	AOK55698.1	WT74_23215	WT74_23230	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AOK55696.1	AOK55699.1	WT74_23215	WT74_23235	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
AOK55696.1	AOK55701.1	WT74_23215	WT74_23245	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AOK55696.1	AOK55702.1	WT74_23215	WT74_23255	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Glycosyl transferase family 28; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
AOK55696.1	AOK57452.1	WT74_23215	WT74_23210	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.881
AOK55696.1	AOK57453.1	WT74_23215	WT74_23220	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
AOK55696.1	AOK57454.1	WT74_23215	WT74_23250	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AOK55697.1	AOK55696.1	WT74_23225	WT74_23215	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	0.552
AOK55697.1	AOK55698.1	WT74_23225	WT74_23230	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
AOK55697.1	AOK55699.1	WT74_23225	WT74_23235	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AOK55697.1	AOK55701.1	WT74_23225	WT74_23245	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
AOK55697.1	AOK55702.1	WT74_23225	WT74_23255	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 28; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
AOK55697.1	AOK57452.1	WT74_23225	WT74_23210	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.643
AOK55697.1	AOK57453.1	WT74_23225	WT74_23220	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
AOK55697.1	AOK57454.1	WT74_23225	WT74_23250	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
AOK55698.1	AOK55696.1	WT74_23230	WT74_23215	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.	0.501
AOK55698.1	AOK55697.1	WT74_23230	WT74_23225	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	O-antigen transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
AOK55698.1	AOK55699.1	WT74_23230	WT74_23235	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
AOK55698.1	AOK55701.1	WT74_23230	WT74_23245	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699

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