(5 nodes) Copper binding periplasmic protein CusF, and Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA network (Burkholderia stagnalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOK55610.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	AOK55611.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	AOK57440.1	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (507 aa)
	AOK55612.1	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1068 aa)
	AOK55613.1	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)

Your Current Organism:

Burkholderia stagnalis

NCBI taxonomy Id: 1503054
Other names: B. stagnalis, Burkholderia sp. Bp6893, Burkholderia sp. Bp6916, Burkholderia sp. Bp7118, Burkholderia sp. Bp7119, Burkholderia sp. Bp7120, Burkholderia sp. Bp7137, Burkholderia sp. Bp7139, Burkholderia sp. Bp7142, Burkholderia sp. Bp7143, Burkholderia sp. Bp7145, Burkholderia sp. Bp7260, Burkholderia sp. Bp7266, Burkholderia sp. Bp7278, Burkholderia sp. Bp7280, Burkholderia sp. Bp7282, Burkholderia sp. Bp7288, Burkholderia sp. Bp7466, Burkholderia sp. Bp7469, Burkholderia sp. Bp7471, Burkholderia sp. Bp7483, Burkholderia sp. Bp7485, Burkholderia sp. Bp7491, Burkholderia sp. Bp7519, Burkholderia sp. Bp7520, Burkholderia sp. Bp7521, Burkholderia sp. Bp7554, Burkholderia sp. Bp7555, Burkholderia sp. Bp7571, Burkholderia sp. Bp7572, Burkholderia sp. Bp7635, Burkholderia sp. Bp7636, Burkholderia sp. Bp7639, Burkholderia sp. Bp7640, Burkholderia sp. Bp7641, Burkholderia sp. Bp7642, Burkholderia sp. Bp7643, Burkholderia sp. Bp7644, Burkholderia sp. Bp7645, Burkholderia sp. Bp7651, Burkholderia sp. Bp7656, Burkholderia sp. Bp7657, Burkholderia sp. Bp7658, Burkholderia sp. Bp7663, Burkholderia sp. Bp7665, Burkholderia sp. Bp7666, Burkholderia sp. Bp7667, Burkholderia sp. Bp7670, Burkholderia sp. Bp7671, Burkholderia sp. Bp7673, Burkholderia sp. Bp7681, Burkholderia sp. Bp7682, Burkholderia sp. Bp7684, Burkholderia sp. Bp7685, Burkholderia sp. Bp7686, Burkholderia sp. Bp7687, Burkholderia sp. Bp7690, Burkholderia sp. Bp7692, Burkholderia sp. Bp7693, Burkholderia sp. Bp7694, Burkholderia sp. Bp7697, Burkholderia sp. Bp7698, Burkholderia sp. Bp7699, Burkholderia sp. Bp7705, Burkholderia sp. Bp7707, Burkholderia sp. LMG 28156, Burkholderia sp. LMG 28157, Burkholderia sp. R-52095, Burkholderia sp. R-52096, Burkholderia sp. R-52235, Burkholderia sp. R-52237, Burkholderia sp. R-52238, Burkholderia sp. R-52240, Burkholderia stagnalis De Smet et al. 2015, CCUG 65686, LMG 28156, LMG:28156

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOK55610.1	AOK55611.1	WT74_22720	WT74_22725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AOK55610.1	AOK55612.1	WT74_22720	WT74_22735	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.564
AOK55610.1	AOK55613.1	WT74_22720	WT74_22740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AOK55610.1	AOK57440.1	WT74_22720	WT74_22730	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.547
AOK55611.1	AOK55610.1	WT74_22725	WT74_22720	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AOK55611.1	AOK55612.1	WT74_22725	WT74_22735	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.946
AOK55611.1	AOK55613.1	WT74_22725	WT74_22740	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AOK55611.1	AOK57440.1	WT74_22725	WT74_22730	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.970
AOK55612.1	AOK55610.1	WT74_22735	WT74_22720	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
AOK55612.1	AOK55611.1	WT74_22735	WT74_22725	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
AOK55612.1	AOK55613.1	WT74_22735	WT74_22740	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AOK55612.1	AOK57440.1	WT74_22735	WT74_22730	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.989
AOK55613.1	AOK55610.1	WT74_22740	WT74_22720	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AOK55613.1	AOK55611.1	WT74_22740	WT74_22725	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AOK55613.1	AOK55612.1	WT74_22740	WT74_22735	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.904
AOK55613.1	AOK57440.1	WT74_22740	WT74_22730	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.879
AOK57440.1	AOK55610.1	WT74_22730	WT74_22720	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
AOK57440.1	AOK55611.1	WT74_22730	WT74_22725	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
AOK57440.1	AOK55612.1	WT74_22730	WT74_22735	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.	0.989
AOK57440.1	AOK55613.1	WT74_22730	WT74_22740	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.879

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